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scnpilot_solids1_trim150_scaffold_148_36

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 36907..38619

Top 3 Functional Annotations

Value Algorithm Source
Amino acid transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 554.0
  • Bit_score: 841
  • Evalue 5.30e-241
Amino acid transporter {ECO:0000313|EMBL:EIM01504.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 554.0
  • Bit_score: 841
  • Evalue 7.50e-241
amino acid-polyamine-organocation (apc) superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 524.0
  • Bit_score: 802
  • Evalue 8.60e-230

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
GTGATCTGCGATGATCGGGAACTGTTTTTGCCGGAAAAGGCTGTCGCGATGAGCAACGAATCCGCACTCCGCCGCAACGTCGGCGCGTGGGCACTGATGTTCACGGGCCTCGGTTCGATCATCGGCTCGGGCTGGCTGTTCGGAGCATGGCGCGCGGCGCAGCTTGCGGGCCCCGGCGCGGTCTGGGCGTGGCTGATCGGCGCGGTGGTGATCCTGTTCATCGCGGTCACCTATGCCGAACTCGGCGCGATGTTCCCGGAATCCGGCGGCATGGTGCGTTACGGGCAGTATTCGCACGGCACGCTGGTCGGCTTCATCGCGGCATGGGCCAACTGGATCGCGATCGCCTCGGTGATCCCGGTCGAAGCCGAGGCTTCGGTGCAATACATGGCCTCGTGGCCGTGGCAGTGGGCGCAGCACCTGTACCACCACGCCCCCGGCGGCGCCGGCACCTTGAGCGCCACCGGCCTTGCGATCGCTGCCGTGCTGGTGATCGGGTATTTCCTGCTGAACTACTGGAGCGTGAATCTTTTCGCGAAGACCAACGCATGGATCACGCTGTACAAGCTGATCGTGCCCGCGCTCACCGCGATCGCCTTGATGGCGACCTCGTTCCATCCCGAGAACTTCCACGTCGGTGCGCACGGCGGACCGCACGCTTACAGCATCTCGGCGATCCTGACCGCGGTCGCGATCAGCGGCATCGTGTTCAGCTTCAACGGCTTCCAGAGCCCGGTGAATCTCGCCGGGGAGGCCAGGAACCCCGGCCGCAGCGTGCCTTTCGGGGTCATCGGTTCGATCGTGCTGGCGACGATCGTGTACCTGTTGCTGCAGGTGGCATTCCTCGGTGCGGTGGAACCCGCGGACCTGGCCAAGGGCGGTTGGTATGCGCTGGATTTCTCGTCGCCGTTCGCGCAACTGGCGCTGGCGTTGAACCTGAACTGGCTGGCGCTGCTGCTGTATTCGGACGCCTTCATCAGCCCGTCCGGCACCGGCGCGACCTACACCGCGACCACCGCGCGCATGATCTACGGGATGCAACGCAACGGCACGCTGCCGAAAGTCTTCGGCCGGGTGCACCCGCGCTTCGGGATTCCACGCCCGGCGATGTGGCTGAACCTGGTGGTCGCCTTCATCTTCATGTTCTTCTTCCGCGGATGGGCAACGCTGGCCGAAGTGATTTCGGTCGCGACCATCATTTCGTACCTCACCGGGCCCGTCAGCGTGTCGGTGCTCAGGCGCACCGCGCCGGAACTGCATCGCCCGCTGAGGATTCCGCTGTTGCCTGTGATCGCAGGACTCGCGTTCGTGTTCGCGACCGAACTGCTCTACTGGGCGCGCTGGCCGCGCACCGGTGAGATCATCCTGCTGATGGTGGTCGCACTGCCGATCTGGCTCTGGTACGCCGTGAAGCGTGGCGGCACGGATTTGATGCGACAGGTGCGCGGTGCGCTGTGGCTGATCTTCTACCTCCCCACGATCGCGTTGCTGTCATGGGCCGGCAGCGCCAAGTTCGGCGGGCACGGTTACCTGCCCTACGGTTGGGATTTGCTGATCGTCGCCGTCATCGCGCTCGCGTTTTTCGCGTGGGGCCTGGCGTGCGGTTGGCGCACGCCGGAAGTCGAGGCGATCAGGATGGAAGCGAATGCACACCCCGATGCAGTCATGGTGCCGCCGGATGAAGCAACGGCCGAGCGCATGATCGGACGATAG
PROTEIN sequence
Length: 571
VICDDRELFLPEKAVAMSNESALRRNVGAWALMFTGLGSIIGSGWLFGAWRAAQLAGPGAVWAWLIGAVVILFIAVTYAELGAMFPESGGMVRYGQYSHGTLVGFIAAWANWIAIASVIPVEAEASVQYMASWPWQWAQHLYHHAPGGAGTLSATGLAIAAVLVIGYFLLNYWSVNLFAKTNAWITLYKLIVPALTAIALMATSFHPENFHVGAHGGPHAYSISAILTAVAISGIVFSFNGFQSPVNLAGEARNPGRSVPFGVIGSIVLATIVYLLLQVAFLGAVEPADLAKGGWYALDFSSPFAQLALALNLNWLALLLYSDAFISPSGTGATYTATTARMIYGMQRNGTLPKVFGRVHPRFGIPRPAMWLNLVVAFIFMFFFRGWATLAEVISVATIISYLTGPVSVSVLRRTAPELHRPLRIPLLPVIAGLAFVFATELLYWARWPRTGEIILLMVVALPIWLWYAVKRGGTDLMRQVRGALWLIFYLPTIALLSWAGSAKFGGHGYLPYGWDLLIVAVIALAFFAWGLACGWRTPEVEAIRMEANAHPDAVMVPPDEATAERMIGR*