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scnpilot_solids1_trim150_scaffold_227_30

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 34424..35668

Top 3 Functional Annotations

Value Algorithm Source
LysM repeat-containing protein; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 426.0
  • Bit_score: 250
  • Evalue 9.20e-64
LysM repeat-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P4_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 426.0
  • Bit_score: 250
  • Evalue 2.90e-63
LysM repeat-containing protein {ECO:0000313|EMBL:AFC86860.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 426.0
  • Bit_score: 250
  • Evalue 4.10e-63

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGAGTGCGCAACGCGCCGGGAGCCGCTTCATCCTGACGCTCGCCGCGTGTGCATTGCTCGCCGCCTGCGCCACGCCGCCCACCAAACCGACGCCGAAACCCGCGACGGTGATCGCGCGCCCTGCGCCACCACCGCCGACCCTGACACCGCTTGCGCCGGTCATCGCCGAGAACGAACCCTGGGCCAGCCTCGTCGCCAGCTTCGCGATGGACGATTGTTCCGACTCGCCGCTGATCCGCGCGCGCGAAGCGATGTTCACCCGTTCGCCAGCCCGGTTCGAGCAGTTGTTGCAGCAATCGCTGCCGTTGATGATGTACGTGCACAAGGAATTGCAGGCTGCCGGAATTCCTGGCGAATTTGCAATGTTGCCGATGCTGGAAAGCTCGTACAACCCGCACGAGCCCAGCCGTCGCGGCGACCCTGCCGGCATGTGGCAATTGATGCCGCGCACCGCTCACATGCATGGCATCGTGGTCGACCGCCACTATGACGGTCGCCTCGATCCCGTCGCCTCGACCCGCGTCGCAGTCAAGATGCTGGCCGCCTTCGGCGAACGCTTCGGCGACTGGCGACTGGCCGACATGGCCTACAACGCGGGGCCTTACGCGGTGCTCGGTGCACTGCGCGGGGACCCGGACCTGGGCGACTCCGGGATTCCCGACATCCCGATCAACAACACCACCCGCAACCACCTCGCCAAGCTGATGGCGCTCGCCTGCATCCTGCGCGAACCGGAACGCTTCCGCGTCGAGCTGCCCAAGCCCTCCGCGAACGATGAACTGGCGACCGTGCTGGTCCCCGCCGGCACCCGCCTGGCCGCCGCGGCCAACATGGCGGAAACCACGGAGTCCGCGTTGCGCGCGCTGAACCCGGGTTACCTCGGCGCGAGCATTCCCGCCAGCAGCCCCCGCACCCTGCTGCTCCCGGCGGGTGCGGCGCAATCGCTGGCGGCGGCATTGACGGTGAACGCGTCGGAGGCGATCGCACAAGTCAGCACGCGGGAACGCAACGCGGGCCCCGGCGGCAACCTCCCGTTGCCGGCCGAACCCGCGCCGCCGCAGGCCAGCCCCGACAGCCTGGCTCCGGCGACAACGGCGCACGCGAAGCGCCATCGCGTGCGCAAGGGCGAAACCCTGTGGTCGATCGCGCAACGCTACCACGTGAGCGTGGACGACCTGAAACGCTGGAACGACTTGCACGGCAGCGTGGTGCACCCGGGCGAACTGCTGCACATCCGGGGCTGA
PROTEIN sequence
Length: 415
MSAQRAGSRFILTLAACALLAACATPPTKPTPKPATVIARPAPPPPTLTPLAPVIAENEPWASLVASFAMDDCSDSPLIRAREAMFTRSPARFEQLLQQSLPLMMYVHKELQAAGIPGEFAMLPMLESSYNPHEPSRRGDPAGMWQLMPRTAHMHGIVVDRHYDGRLDPVASTRVAVKMLAAFGERFGDWRLADMAYNAGPYAVLGALRGDPDLGDSGIPDIPINNTTRNHLAKLMALACILREPERFRVELPKPSANDELATVLVPAGTRLAAAANMAETTESALRALNPGYLGASIPASSPRTLLLPAGAAQSLAAALTVNASEAIAQVSTRERNAGPGGNLPLPAEPAPPQASPDSLAPATTAHAKRHRVRKGETLWSIAQRYHVSVDDLKRWNDLHGSVVHPGELLHIRG*