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scnpilot_solids1_trim150_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_227_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1109
DNA (1107bp) protein (369aa)
metallophosphoesterase n=1 Tax=Pseudomonas fragi RepID=UPI0002883E52
Putative membrane-attached phosphoesterase {ECO:0000313|EMBL:CDM25227.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
membrane-attached phosphoesterase
scnpilot_solids1_trim150_scaffold_227_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1093..1794)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAS2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96563.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_227_3
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1987..4137
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C1F14 rbh
glycoside hydrolase clan GH-D
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_227_4
Synechococcus phage S-SKS1, Caudovirales, Viruses

Not on your lists

4221..4817
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364A62B rbh
Uncharacterized protein {ECO:0000313|EMBL:AGH31515.1}; TaxID=754042 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Synechococcus phage S-SKS1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_227_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4839..6656)
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003771740 rbh
TPR domain protein {ECO:0000313|EMBL:GAD58948.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_227_6
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6714..7790)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A4777 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KGI77037.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alpha/beta hydrolase domain-containing protein
scnpilot_solids1_trim150_scaffold_227_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7821..10088)
DNA (2268bp) protein (756aa)
Glycoside hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAQ0_9GAMM rbh
Glycoside hydrolase {ECO:0000313|EMBL:EIL96541.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
trehalose/maltose hydrolase or phosphorylase
scnpilot_solids1_trim150_scaffold_227_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10210..12462)
DNA (2253bp) protein (751aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM
trehalose/maltose hydrolase or phosphorylase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_227_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..15297)
DNA (2634bp) protein (878aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382D88B rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL96539.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_227_10
unknown

Not on your lists

15498..16094
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_227_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16072..17112
DNA (1041bp) protein (347aa)
LacI family transcription regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034D875D
LacI family transcriptional regulator {ECO:0000313|EMBL:KGI77569.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_227_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17285..18958
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030750FE rbh
Trehalase {ECO:0000313|EMBL:AIF47010.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
neutral trehalase
scnpilot_solids1_trim150_scaffold_227_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19021..20409
DNA (1389bp) protein (463aa)
MFS transporter, SP family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVX3_9GAMM rbh
D-galactose transporter {ECO:0000313|EMBL:GAN44973.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
MFS transporter, SP family; K08137 MFS transporter, SP family, galactose:H+ symporter rbh
scnpilot_solids1_trim150_scaffold_227_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20527..21558)
DNA (1032bp) protein (344aa)
Pass1-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_227_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21555..22193)
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
phosphoribosylanthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVF0_9GAMM
scnpilot_solids1_trim150_scaffold_227_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22190..22963)
DNA (774bp) protein (258aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
tRNA pseudouridine synthase A n=1 Tax=Dyella ginsengisoli RepID=UPI00035E89A3
pseudouridylate synthase I
scnpilot_solids1_trim150_scaffold_227_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22978..25071)
DNA (2094bp) protein (698aa)
FimV N-terminal domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLE9_9GAMM
Fimbrial protein FimV {ECO:0000313|EMBL:AIF48564.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
FimV N-terminal domain protein
scnpilot_solids1_trim150_scaffold_227_18
unknown

Not on your lists

comp(25210..25533)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_227_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25559..26587)
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
semialdehyde dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI000344AD89
scnpilot_solids1_trim150_scaffold_227_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26668..27771)
DNA (1104bp) protein (368aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD3_9GAMM
scnpilot_solids1_trim150_scaffold_227_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27805..28329)
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM05_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL88246.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyltransferase, ribosomal protein N-acetylase
scnpilot_solids1_trim150_scaffold_227_22
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28331..29398)
DNA (1068bp) protein (356aa)
protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IG89_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ08912.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
scnpilot_solids1_trim150_scaffold_227_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29453..30286
DNA (834bp) protein (278aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
phosphatidylserine decarboxylase n=1 Tax=Dyella ginsengisoli RepID=UPI000346B2E8
phosphatidylserine decarboxylase precursor
scnpilot_solids1_trim150_scaffold_227_24
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30423..30875
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D84209
Uncharacterized protein {ECO:0000313|EMBL:KJV37158.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_227_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30937..31629
DNA (693bp) protein (231aa)
protein serine/threonine phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
protein phosphatase n=1 Tax=Xanthomonadaceae RepID=UPI00029A2262
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ACF50551.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_227_26
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31664..32389)
DNA (726bp) protein (242aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P0_FRAAD
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AFC86856.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids1_trim150_scaffold_227_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32386..32838)
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
RNase H n=1 Tax=Dyella japonica RepID=UPI0002EFCE87
ribonuclease HI
scnpilot_solids1_trim150_scaffold_227_28
unknown

Not on your lists

comp(32835..33485)
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_227_29
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33648..34427
DNA (780bp) protein (260aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN66_9GAMM
hydroxyacylglutathione hydrolase
scnpilot_solids1_trim150_scaffold_227_30
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34424..35668
DNA (1245bp) protein (415aa)
LysM repeat-containing protein; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
LysM repeat-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P4_FRAAD
LysM repeat-containing protein {ECO:0000313|EMBL:AFC86860.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Displaying items 1-30 of 50 in total

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