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scnpilot_solids1_trim150_scaffold_239_24

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 21655..22044

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraR n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D4183 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 122.0
  • Bit_score: 96
  • Evalue 1.70e-17
NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96230.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 126.0
  • Bit_score: 103
  • Evalue 2.50e-19
C4-type zinc finger DksA/TraR family protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 123.0
  • Bit_score: 91
  • Evalue 2.90e-16

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCACCTTGACGCAAGCACAAATCACGCATCTGTCGAAGCTGATGGACGAGCGTTACGAACGCGAGAGGAAGGAGATCGCCACGGTCACGCAGCGGGCGCGGGAGCAGCTGGATGAAGGCGTGTCGGCCGACTGGGTCGATGCGGCGCTGACCGAGTCCACCCTCGCGTCGGACGATGCGGTGATCAAGCAGGACGTCGCGGACATCCGCGACATCCTCGCCGCGCGCGAGCGCCTGTCGGCAGGCGTCTACGGCATCTGCACGGACTGCGGCGAAGCGATTGCCTACGAACGCCTGTTGGCGTACCCCACGGCCAAACGTTGCATCCACTGCCAGCGTTTGCACGAACGGGACAAGGCCGGGCGCGAAATTCCGCGTGGCTCGTAG
PROTEIN sequence
Length: 130
MATLTQAQITHLSKLMDERYERERKEIATVTQRAREQLDEGVSADWVDAALTESTLASDDAVIKQDVADIRDILAARERLSAGVYGICTDCGEAIAYERLLAYPTAKRCIHCQRLHERDKAGREIPRGS*