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scnpilot_solids1_trim150_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_239_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..711
DNA (711bp) protein (237aa)
Probable potassium transport system protein kup n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGT6_9GAMM
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
K+ transporter
scnpilot_solids1_trim150_scaffold_239_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

757..1800
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Holliday junction DNA helicase RuvB n=1 Tax=Dyella japonica RepID=UPI0002E55F31
Holliday junction DNA helicase subunit RuvB
scnpilot_solids1_trim150_scaffold_239_3

Not on your lists

1805..2245
DNA (441bp) protein (147aa)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EQD65825.1}; EC=3.1.2.- {ECO:0000313|EMBL:EQD65825.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=T1CFS2_9ZZZZ
scnpilot_solids1_trim150_scaffold_239_4

Not on your lists

2242..2967
DNA (726bp) protein (242aa)
Colicin uptake protein TolQ n=1 Tax=mine drainage metagenome RepID=T1CHJ9_9ZZZZ rbh
Colicin uptake protein TolQ {ECO:0000313|EMBL:EQD65824.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Cell division and transport-associated protein TolQ
scnpilot_solids1_trim150_scaffold_239_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2990..3448
DNA (459bp) protein (153aa)
TolR protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZH0_9GAMM
Biopolymer transporter TolR {ECO:0000313|EMBL:KGI77015.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Cell division and transport-associated protein TolR
scnpilot_solids1_trim150_scaffold_239_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3435..4361
DNA (927bp) protein (309aa)
F0F1-type ATP synthase, beta subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NJA7_9GAMM
F0F1-type ATP synthase, beta subunit
F0F1-type ATP synthase, beta subunit {ECO:0000313|EMBL:AGG87886.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_239_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4376..5689
DNA (1314bp) protein (438aa)
translocation protein TolB n=1 Tax=Dyella ginsengisoli RepID=UPI000348EC94
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
tol-pal system beta propeller repeat protein TolB
scnpilot_solids1_trim150_scaffold_239_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5776..6285
DNA (510bp) protein (170aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Z7_9GAMM
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EIL96288.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
peptidoglycan-associated lipoprotein
scnpilot_solids1_trim150_scaffold_239_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6291..7091
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E4EE2E
Tol-pal system protein {ECO:0000313|EMBL:AIF47055.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
tol-pal system protein YbgF
scnpilot_solids1_trim150_scaffold_239_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7088..7786
DNA (699bp) protein (233aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
7-cyano-7-deazaguanine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJB2_9GAMM
queuosine biosynthesis protein QueC
scnpilot_solids1_trim150_scaffold_239_trna_1
unknown

Not on your lists

8056..8127
DNA (72bp)
transferRNA Lys
scnpilot_solids1_trim150_scaffold_239_11
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8278..8565)
DNA (288bp) protein (96aa)
Addiction module antidote protein, HigA (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZGG0_9ZZZZ
proteic killer active protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_239_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8575..8718)
DNA (144bp) protein (48aa)
plasmid maintenance system killer n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026249DD
Plasmid maintenance system killer HigB like {ECO:0000313|EMBL:CDW95287.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
HigB toxin protein
scnpilot_solids1_trim150_scaffold_239_13
unknown

Not on your lists

comp(8896..9087)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_239_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9230..9835)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C45D6
Uncharacterized protein {ECO:0000313|EMBL:EIM02934.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sortase-like acyltransferase
scnpilot_solids1_trim150_scaffold_239_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9967..11142)
DNA (1176bp) protein (392aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] rbh
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Acetate kinase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULV9_METS4 rbh
scnpilot_solids1_trim150_scaffold_239_16
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11139..12086)
DNA (948bp) protein (316aa)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8]
MaoC domain protein dehydratase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB58_METNO
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:KGM39921.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
scnpilot_solids1_trim150_scaffold_239_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12220..13260
DNA (1041bp) protein (347aa)
alcohol dehydrogenase (EC:1.1.1.1); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Alcohol dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INX0_9SPHN rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AHX14057.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_239_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13260..15719
DNA (2460bp) protein (820aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Probable phosphoketolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXE4_9GAMM
phosphoketolase
scnpilot_solids1_trim150_scaffold_239_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15733..16809)
DNA (1077bp) protein (359aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372B9EB
Uncharacterized protein {ECO:0000313|EMBL:AHX16254.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_239_20
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16999..17721
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362D5F4
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_239_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17728..19779)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034919E3 rbh
Histidine kinase {ECO:0000313|EMBL:AHX13318.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
multi-sensor hybrid histidine kinase rbh
scnpilot_solids1_trim150_scaffold_239_22
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19780..20496)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344DA41 rbh
ompR; putative transcriptional regulatory protein OmpR
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_239_23
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20694..21644
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B835_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERI53222.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
universal stress protein, UspA family
scnpilot_solids1_trim150_scaffold_239_24
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21655..22044
DNA (390bp) protein (130aa)
conjugal transfer protein TraR n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D4183
NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96230.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
C4-type zinc finger DksA/TraR family protein
scnpilot_solids1_trim150_scaffold_239_25
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22154..22807
DNA (654bp) protein (218aa)
Putative transport associated protein n=1 Tax=Ralstonia solanacearum RepID=D8NSW5_RALSL
transport associated protein
Putative transport associated protein {ECO:0000313|EMBL:CBJ50910.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
scnpilot_solids1_trim150_scaffold_239_26
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22876..23313
DNA (438bp) protein (146aa)
Universal stress protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SC87_9BURK
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
universal stress protein, uspa
scnpilot_solids1_trim150_scaffold_239_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23358..24905
DNA (1548bp) protein (516aa)
cytochrome bd-type quinol oxidase, subunit 1 (EC:1.10.3.-)
Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN41_9GAMM
Cytochrome BD oxidase subunit I {ECO:0000313|EMBL:EYR70229.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_239_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24937..25062
DNA (126bp) protein (42aa)
Protein ybgT n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T8_9GAMM
Cyd operon protein YbgT {ECO:0000313|EMBL:EYR70231.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
cyd operon protein YbgT
scnpilot_solids1_trim150_scaffold_239_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25141..26544
DNA (1404bp) protein (468aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E87BAC
oxygen-independent coproporphyrinogen III oxidase
Displaying items 1-30 of 58 in total

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