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scnpilot_solids1_trim150_scaffold_471_12

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(13991..14578)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376D47E similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 192.0
  • Bit_score: 308
  • Evalue 4.30e-81
  • rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL95143.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 193.0
  • Bit_score: 305
  • Evalue 6.60e-80
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 192.0
  • Bit_score: 302
  • Evalue 9.60e-80

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGGGCGATGTGGAAACCGATCGTGCCCTCGTGGAGCGCGTGCGCAAGGGCGACAACCGGGCGTTCGACCTGCTGGTGCGCAAGTACCGGCACAAGATCGTCGGGCTGGTGTCGCGTTACGTGCACGACTGGAGCGAGTGCGAGGACGTGGCGCAGGAAGCCTTCATCCGCGCCTATCGCGCGATCGGCGCGTTCCGTGGAGACAGCGCGTTTTACACCTGGATGTACAAGATCGCCGTGAACACCGCGAAGAACCACCTGGTCGCGCAGGGCCGCCGGCCGCCGGCCGAGGACATCGATGCGGACACCGCCGTCCAGTTCGACGCTGGCGCCCGCCTGCGCGACGAAGCCACCCCCGAACACGAACTGGCCCGCCGCGAGATTGAACAAACCGTGTTCGCCACGGTCGAAAAGCTGCCGGAAGAATTGCGCGACGCGATCACCCTGCGCGAGGTCGAGGGATTGTCCTACGAGGAAATCGCCGAACGCATGGGCTGCCCGATCGGCACGGTGCGTTCGCGCATTTTCCGGGCCCGCGAGGCGATCGACGAGAAACTGCGCCCGCTGTTGTCCGACGATGCCGCCTGA
PROTEIN sequence
Length: 196
MGDVETDRALVERVRKGDNRAFDLLVRKYRHKIVGLVSRYVHDWSECEDVAQEAFIRAYRAIGAFRGDSAFYTWMYKIAVNTAKNHLVAQGRRPPAEDIDADTAVQFDAGARLRDEATPEHELARREIEQTVFATVEKLPEELRDAITLREVEGLSYEEIAERMGCPIGTVRSRIFRAREAIDEKLRPLLSDDAA*