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scnpilot_solids1_trim150_scaffold_471_24

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(28991..29935)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 314.0
  • Bit_score: 455
  • Evalue 1.90e-125
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 314.0
  • Bit_score: 455
  • Evalue 5.90e-125
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 314.0
  • Bit_score: 457
  • Evalue 1.30e-125

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGGGACGGCAACTTCGGCTCAAGAGTTCAGTTCCGTGCGAACCGTGCAGGTCGGCCCGGAACGCGACGGACAGCGGCTGGACAATTGTCTTGCAGCCATGCTCAAGGGCGTGCCGAAAGGGCATATTTACCGCCTGCTGCGGACGGGACAGGTGCGGGTGAACGGCAAGCGCGCGAAACCCGACACCCGGTTGGCGGCGGGCGACCAGTTGCGGATTCCCCCGGTGCGGGTCGCCGAGCGTCCGGAGCCCGGCGCGCCGCCCCCGGGAATGCTGGACGAAATCCGCAAGGCCGTGATTTTCGAGGACAAGGATTTCCTCGCCATCGACAAGCCGGCCGGGATCGCCAGCCACGGCGGCAGCGGGATTGCGTTCGGAGCGATCGAACTGCTGCGCGCGGCGCGTCCCATGGATCATCTGGAACTCGTGCATCGGCTCGATCGCGATACCTCCGGCGTGCTGGTGTTCGCGCGTTCGCGGCGCGGGCTGACCGGCGTGCAGGCGCTGATCCGCGCGGGTGAAACCAGGAAGCAGTACCTGTGCCTGATGACCGGCAAGCTGCGGCGCGCGAAGTTCGACGTGAATGCGCCACTGCGGAAATCGGTATTGCAGGGCGGCGAGCGGATGGTGCGGGTGGACGATGAAGGCAAACCGGCGTTGACGTTCTTCAGGCAGATCGAACGCTACGACAACGCGAGTCTGGTCGAAGCCACGCTCGCCACCGGCCGCACGCACCAGATCCGCGTGCACGCCGCGTACGCGGGTTATCCGCTGGCGGGCGATCCGAAGTACGGCGAGCGCGAGGCCAACCGGCACTTCGCCAAACTCGGCCTCAGGCGCATGTTCCTGCATGCGGCGCGCTTCGAATTCGAACTGGGTGAGCGCGCCTACAGTTTCTCCGCGCCGCTGCCGGACGACCTGCGAGGGGTGCTCGACCGGCTGTGA
PROTEIN sequence
Length: 315
MGTATSAQEFSSVRTVQVGPERDGQRLDNCLAAMLKGVPKGHIYRLLRTGQVRVNGKRAKPDTRLAAGDQLRIPPVRVAERPEPGAPPPGMLDEIRKAVIFEDKDFLAIDKPAGIASHGGSGIAFGAIELLRAARPMDHLELVHRLDRDTSGVLVFARSRRGLTGVQALIRAGETRKQYLCLMTGKLRRAKFDVNAPLRKSVLQGGERMVRVDDEGKPALTFFRQIERYDNASLVEATLATGRTHQIRVHAAYAGYPLAGDPKYGEREANRHFAKLGLRRMFLHAARFEFELGERAYSFSAPLPDDLRGVLDRL*