ggKbase home page

scnpilot_solids1_trim150_scaffold_483_12

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 13948..14526

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 189.0
  • Bit_score: 262
  • Evalue 3.70e-67
ribosomal large subunit pseudouridine synthase E n=1 Tax=Xanthomonas vasicola RepID=UPI0001CBFFB1 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 189.0
  • Bit_score: 262
  • Evalue 2.60e-67
ribosomal large subunit pseudouridine synthase e protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 178.0
  • Bit_score: 260
  • Evalue 5.40e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas vasicola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCTCGTCCTCTTCCACAAACCGTTCAACGTGCTGTGCCAGTTCACCGACCGCAGCGCGACGCCGCGACGCACGCTGGCGGAATTCGGCTTGCCGCCGAACGTCTATCCGGCAGGCAGGCTCGACTTCGATTCCGAAGGTTTGTTGCTGCTGACCGACGACGGCGCGCTGGCGCACCGCATCACCGATCCGCGCCACAAGCTGGCGAAAACCTACCTGGCGCAAGTGGAGGGCACGCCGACTGCGACCGCCCTGCAACGCCTGCGCAGCGGGGTCGATCTGAAGGACGGCACCACGCTGCCGGCCGAAGCGCGTCCTCTGGAACGCGCGCCCGAGTGGCTGGGACCGCGCGACCCGCCGGTGCGCTTCCGCAAGACGGTGCCGGATGCATGGATCGAACTGACGATCCGCGAAGGCCGCAACCGCCAGGTGCGGCGCATGACCGCAGCGGTGGGCCTGCCGACGTTGCGGCTGGTGCGCGTCCGGGTCGGTGACTGTTCGCTCGATGATCTCGCACCCGGTGCGCACCGCATCATCGAATCGCAAGCCAGGCGTCATCCACGAGGAACACCGCGATGA
PROTEIN sequence
Length: 193
MLVLFHKPFNVLCQFTDRSATPRRTLAEFGLPPNVYPAGRLDFDSEGLLLLTDDGALAHRITDPRHKLAKTYLAQVEGTPTATALQRLRSGVDLKDGTTLPAEARPLERAPEWLGPRDPPVRFRKTVPDAWIELTIREGRNRQVRRMTAAVGLPTLRLVRVRVGDCSLDDLAPGAHRIIESQARRHPRGTPR*