ggKbase home page

scnpilot_solids1_trim150_scaffold_2045_8

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(7070..7984)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CD61A similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 329.0
  • Bit_score: 349
  • Evalue 4.40e-93
Rare lipoprotein A {ECO:0000313|EMBL:EIL98329.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 301.0
  • Bit_score: 337
  • Evalue 1.90e-89
rare lipoprotein A similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 301.0
  • Bit_score: 334
  • Evalue 2.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGACGCGGGGCGGATGGTTTCGCGTCCCGCTGCCGCTCGCGCTGCTGGCGCTGGCGGCGCTGACGTTGACGGGATGCTCGTCGAATCCGAAACGGCCCGCCGCGCGCGAGGGCGGCACGGGCAGCGGCACGTCGTGGCGCGACAACACCGGCCTCTCGCAATTCGATCGCTACCACCAGCGCGACGATTCGACGCCCGACATCGCGGCGGTCGATTTCAGCAGGATCCCGGAGCCCGTGCCCGTCGCCGAACCGCCGTCGCGTTACGGCAACAAGTCGCCCTACACGGTGAGGGGCGAGACCTATCGCGTGCTGCCCAGCGCCGCCGGCTACGACGAGCGCGGCATCGCCTCGTACTACGGCAGCAAGTTCCACGGCTACAAGACCTCCGATTTCGAAACCTACGACATGTACAAGTTCTCGGCGGCCAGCAAGGTGCTGCCGCTGCCGAGCTTCGCGCGGGTCACCAATCTCCAGAACGGCAAGAGCGTGATCGTGCGCGTCAACGATCGCGGCCCGTTCGTGCCCAACCGCATCATCGACCTGTCGCTGGCGGCGGCGGTGCGCATCGGCATCTGGCCGCGCGGCACCGGCCTCGTCGAAGTGCAGGGCATCGATCCCGCGCATCCCGATACGGAACCCGCGTCGCCCGCGGCGGTCACAGTCCGAACGGGTCGGCAGCCGCAGCTTTACGTGCAGGTTGGCGCGTTCGCGGATGCCGGGAATGCGGAGCGGTTGGCAGCCCGCCTGCGCGGCCTGCGACTGGGCACGGTGCGGGTGGTCGCGGCCAGCGTGAACGGACGCACGCTGCAGCGCGTACAGGTCGGTCCGCTGCCCGACGTGGATACGGTCGATCGCACCACGGCGCGGCTGGATGCGCTGGGTTTGCCGCACGCGTCGGTCGCGATACAGTGA
PROTEIN sequence
Length: 305
MTRGGWFRVPLPLALLALAALTLTGCSSNPKRPAAREGGTGSGTSWRDNTGLSQFDRYHQRDDSTPDIAAVDFSRIPEPVPVAEPPSRYGNKSPYTVRGETYRVLPSAAGYDERGIASYYGSKFHGYKTSDFETYDMYKFSAASKVLPLPSFARVTNLQNGKSVIVRVNDRGPFVPNRIIDLSLAAAVRIGIWPRGTGLVEVQGIDPAHPDTEPASPAAVTVRTGRQPQLYVQVGAFADAGNAERLAARLRGLRLGTVRVVAASVNGRTLQRVQVGPLPDVDTVDRTTARLDALGLPHASVAIQ*