ggKbase home page

scnpilot_solids1_trim150_scaffold_686_27

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(23077..23505)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Dyella ginsengisoli RepID=UPI000345D4CC similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 142.0
  • Bit_score: 250
  • Evalue 1.00e-63
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 142.0
  • Bit_score: 250
  • Evalue 1.80e-63
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 142.0
  • Bit_score: 244
  • Evalue 1.70e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGAAGACGTTCAGCGCCAAGGCCGAGACGGTCAAGCGTGACTGGCTCATCGTCGACGCCAACGGCAAGACGCTCGGCCGGCTGTGTTCGGAAGTCGCGCGCCGCCTGCGCGGCAAGCACAAGCCCGAGTTCACCTCGCACGTGGACACCGGCGACTACATCGTCGTGGTCAATGCCGAGAAGGTCGCGGTCACCGGCAACAAGCTGGAAGCGAAGAACTACCATCGCTTCACCGGCTACGTCGGCAACCTGAAGACCACCAATCTCAAGGACCTGCTGGCGACACATCCCGAGCGCGCGATCGAATTCGCCGTGAAGGGCATGCTGCCGAAGAACCCGCTGGGCCGCGCGATGTTCCGCAAGCTCAAGGTGTACCGCGGCGCCGAGCATCCGCATACCGCACAACAGCCCAAGGCGTTGGAGATCTGA
PROTEIN sequence
Length: 143
MKTFSAKAETVKRDWLIVDANGKTLGRLCSEVARRLRGKHKPEFTSHVDTGDYIVVVNAEKVAVTGNKLEAKNYHRFTGYVGNLKTTNLKDLLATHPERAIEFAVKGMLPKNPLGRAMFRKLKVYRGAEHPHTAQQPKALEI*