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scnpilot_solids1_trim150_scaffold_745_1

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(3..479)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEV0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 137.0
  • Bit_score: 185
  • Evalue 4.40e-44
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL97991.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 137.0
  • Bit_score: 185
  • Evalue 6.20e-44
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 149.0
  • Bit_score: 179
  • Evalue 7.60e-43

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGACTTCCCCCATCAACCCCAACCCCGTTCCCGAAGAAGACACCGCCGAGCAGTTGAAGCGGCGGAGGTTGCGCAAGCGGCGCCTGATGTTGCGCAGCCTGGTCGGCGTGATCGTGGTCGTCGCGATCGCGTGGGCGCTGTACCACTTCCTGGTGGGACGCTGGTACGAAGGCACCGACGATGCCTACGTCGACGGCAACGTGGTGCAGATCACGCCGCAGGTGCCGGGCACGGTGATCAGCATCGGCGCCGACGACAACGACTACGTGCGTGAAGGCCAGCCGTTGGTGAAGCTGGATCCGTCCGATGCCGATGTCGCGCTGGCGCAGGCCGAGGCGGCGCTGGCGCAGACGGTGCGCAAGGTGCGCGGCCTGTACAGCACGGTGCATACCTCGAAGGCCGACGTCGCCGCGCGCGAAGCAGTCGCGGAGCAGGCCCAGGCCGATTACCAGCGCCGCAAGGGTCTCGCCGCCTCC
PROTEIN sequence
Length: 159
MTSPINPNPVPEEDTAEQLKRRRLRKRRLMLRSLVGVIVVVAIAWALYHFLVGRWYEGTDDAYVDGNVVQITPQVPGTVISIGADDNDYVREGQPLVKLDPSDADVALAQAEAALAQTVRKVRGLYSTVHTSKADVAAREAVAEQAQADYQRRKGLAAS