ggKbase home page

scnpilot_solids1_trim150_scaffold_815_15

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(20184..20573)

Top 3 Functional Annotations

Value Algorithm Source
TraR/DksA family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 127.0
  • Bit_score: 177
  • Evalue 9.80e-42
DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 128.0
  • Bit_score: 165
  • Evalue 1.20e-38
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 125.0
  • Bit_score: 195
  • Evalue 3.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGTCGCCGCAACAGCAACAGCACACCGGCCTGAGCCGGGAGTTCATCGAGCAGCAGCGCCAGCGCCTGCTGACGCTGCGCCACCTGTTGCTTGGCGGTGAGGAAAGCAACGCCGCGCAAGAACGGGCATTCCAGTTGCAGCACGGCGACGAAGCCGCGGAAGAAGAGGACACGGCACAGGACATGGCGCAACGGGAAGTCGACCAGGCCCTGCACGACGTGGACGACCATCGCATCGCGAACATCGAGCGTGCGCTGCAGAAGATCGGGGAAGGCAGCTATGGCCTGTCCGACCTCAGCGGCAAGCCGATCCCGCAAGACCGCCTCTTGACCACGCCCGAGGCGATCCTCACCGTGCAGGAAGAGCGGGAACGTGAAACGCACCGCTGA
PROTEIN sequence
Length: 130
MSPQQQQHTGLSREFIEQQRQRLLTLRHLLLGGEESNAAQERAFQLQHGDEAAEEEDTAQDMAQREVDQALHDVDDHRIANIERALQKIGEGSYGLSDLSGKPIPQDRLLTTPEAILTVQEERERETHR*