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scnpilot_solids1_trim150_scaffold_815

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_815_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..604
DNA (603bp) protein (201aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase subunit M {ECO:0000313|EMBL:AGG88617.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AGG88617.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH dehydrogenase subunit M n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS8_9GAMM
scnpilot_solids1_trim150_scaffold_815_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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612..2054
DNA (1443bp) protein (481aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI99_9GAMM
scnpilot_solids1_trim150_scaffold_815_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2176..3456
DNA (1281bp) protein (427aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] rbh
4-aminobutyrate aminotransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDM1_PHEZH rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACG78411.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids1_trim150_scaffold_815_4
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3514..5277
DNA (1764bp) protein (588aa)
2-aminoadipate aminotransferase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A29724
Uncharacterized protein {ECO:0000313|EMBL:KFL37531.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_815_5
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5381..6292
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003697804 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37530.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
carbon-nitrogen hydrolase rbh
scnpilot_solids1_trim150_scaffold_815_6
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6326..8791
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036A16B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37529.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_815_7
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8795..10186
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037AC251
Uncharacterized protein {ECO:0000313|EMBL:KFL37528.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_815_8
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10183..11403
DNA (1221bp) protein (407aa)
Major facilitator family transporter, putative n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KTF7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37527.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
major facilitator superfamily transporter
scnpilot_solids1_trim150_scaffold_815_9
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11407..12900
DNA (1494bp) protein (498aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.24); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:ACK53207.1}; EC=1.2.1.24 {ECO:0000313|EMBL:ACK53207.1};; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
Succinic semialdehyde dehydrogenase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZIS0_THASP
scnpilot_solids1_trim150_scaffold_815_10
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12897..14657
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KH01_SIMAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37526.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_815_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14911..15687
DNA (777bp) protein (259aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W005_9GAMM
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EIL92796.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phenazine biosynthesis protein PhzF family
scnpilot_solids1_trim150_scaffold_815_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15777..16199
DNA (423bp) protein (141aa)
membrane protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000301590F
Membrane protein {ECO:0000313|EMBL:KGM50953.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_815_13
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16196..17566
DNA (1371bp) protein (457aa)
L-sorbosone dehydrogenase (EC:1.1.1.-) rbh
sorbosone dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E512B6 rbh
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ETC88110.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
scnpilot_solids1_trim150_scaffold_815_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17696..19852
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380FA37 rbh
Iron transporter {ECO:0000313|EMBL:EIL89120.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_815_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20184..20573)
DNA (390bp) protein (130aa)
TraR/DksA family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI6_9GAMM
DnaK suppressor protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 15 items

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