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scnpilot_solids1_trim150_scaffold_2619_11

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 6615..7178

Top 3 Functional Annotations

Value Algorithm Source
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7H1T4_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 79
  • Evalue 5.30e-12
Transcriptional regulator {ECO:0000313|EMBL:KGU83811.1}; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 173.0
  • Bit_score: 82
  • Evalue 6.70e-13
algR3; alginate regulatory protein AlgR3 similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 166.0
  • Bit_score: 78
  • Evalue 2.20e-12

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Taxonomy

Pseudomonas mediterranea → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGTTACAAAACGGAACCACAAACCCGTGGGCAAGGCCGGCAAGAAAGTCCGCAAGGCGCCCGTCAAGTCCAAGGCCGGCAAGGCATCCGCGATTCGCAAGGCGGCCACGAAACCGGCCACGCGCGCGGCCGTGCGCAAGTCCCGCCCCGTCGCGAAGACGGCTTCCAGGTCCGTGGCCAAGCCTGCCACCGTGAAACAGGTCGCGGTCAAACCGGCTGCCGCAAAACCCGTGGCGCCTGCCAGATCGCCGCTTGCGCGGCCGGCATCGGTCAAGACCGCAGCCAAGGCGGTGGCGGCTGCGCGCGCCAATGCCAGACGGCGTGCGCCATCCTACATCCCCCGTTCCAGTTTCGGTGACGATTGGAAGATGGGCGGCCCGATCGAGTTGCCGCGCCAGCCGGCCCCGGCCGCGCATACGCCGACCCGCAAGCCGCCGAAACCGCGCGCGCCGAAGCCCAAGGCCATCAGCCATGAGCAGGCAGTCGCCAACTTGAAGGCGTTGCTGGAGTCGCGCAAGCGCAAGGATCGCGGTGGCGACGCGGGCGCGCCCAAGGGCGCCTGA
PROTEIN sequence
Length: 188
MVTKRNHKPVGKAGKKVRKAPVKSKAGKASAIRKAATKPATRAAVRKSRPVAKTASRSVAKPATVKQVAVKPAAAKPVAPARSPLARPASVKTAAKAVAAARANARRRAPSYIPRSSFGDDWKMGGPIELPRQPAPAAHTPTRKPPKPRAPKPKAISHEQAVANLKALLESRKRKDRGGDAGAPKGA*