ggKbase home page

scnpilot_solids1_trim150_scaffold_2619

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2619_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..202
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX16_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKS30441.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_2619_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

292..696
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAB0_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_2619_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

766..1557
DNA (792bp) protein (264aa)
Putative methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD67_9GAMM
Putative methyltransferase {ECO:0000313|EMBL:EIL97408.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative methyltransferase
scnpilot_solids1_trim150_scaffold_2619_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1624..2283)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2619_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..3497)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_2619_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3669..4280
DNA (612bp) protein (204aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2619_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4361..5395
DNA (1035bp) protein (345aa)
lipA; lipoic acid synthetase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Lipoyl synthase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJP4_9GAMM
scnpilot_solids1_trim150_scaffold_2619_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5425..5853
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87060.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2619_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5858..6076)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89324.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2619_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6170..6517
DNA (348bp) protein (116aa)
Glutathione-dependent formaldehyde-activating GFA n=2 Tax=Pseudogulbenkiania RepID=G2IYY3_PSEUL
glutathione-dependent formaldehyde-activating GFA
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EEG09221.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
scnpilot_solids1_trim150_scaffold_2619_11
Pseudomonas mediterranea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6615..7178
DNA (564bp) protein (188aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7H1T4_PSESX
Transcriptional regulator {ECO:0000313|EMBL:KGU83811.1}; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;"
algR3; alginate regulatory protein AlgR3
scnpilot_solids1_trim150_scaffold_2619_12
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

7300..7854
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1F6Y0_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESO03824.1, ECO:0000313|EnsemblMetazoa:HelroP173526}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
Displaying 12 items

View Taxonomy