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scnpilot_solids1_trim150_scaffold_1110_15

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(16685..17143)

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNN8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 155.0
  • Bit_score: 148
  • Evalue 5.80e-33
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 149.0
  • Bit_score: 154
  • Evalue 1.10e-34
small protein A (tmRNA-binding) similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 153.0
  • Bit_score: 146
  • Evalue 6.90e-33

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGTCCGGAACGATGCGCAAGACGATATCCACCCTCCTGCTCGCTTCTGCCAGCGTGCTGATGCTCGGGGCCTGCAACCCCATTTACCGGCCCGACGTCCAGCAAGGCAACCTGCTGATCGGCAAGAATGTCGGCGAATTGAAGCCCGGTCTCACCAAGCAGCAAGTCGTGGCGCTGCTGGGCTCGCCCTCGGTGGTCAGTCCGTTCAATGCAAACCAGTGGAATTACGTCGCCACCTTGCAGCGCCGCGGCGGCACCATCAAGGAGCGCACCCTGACGTTGTATTTCGACAACGACACGCTGGTGCGCACCGACGGCGACTTCATGAAGGAAACCCCGCAGGAACTGCTGCAGGAGAGCCACAAGTACGGTCCGCTGTATCCGACCAACCTGACCAAGCAGGAAGTGAAGGACTTGGAGAAGAAACAGCAGCAGGGCGGCGGGGACAGCGGAGGGTGA
PROTEIN sequence
Length: 153
MSGTMRKTISTLLLASASVLMLGACNPIYRPDVQQGNLLIGKNVGELKPGLTKQQVVALLGSPSVVSPFNANQWNYVATLQRRGGTIKERTLTLYFDNDTLVRTDGDFMKETPQELLQESHKYGPLYPTNLTKQEVKDLEKKQQQGGGDSGG*