ggKbase home page

scnpilot_solids1_trim150_scaffold_1575_12

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(11308..12276)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000311F8A8 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 328.0
  • Bit_score: 427
  • Evalue 1.00e-116
Ligand-gated channel protein {ECO:0000313|EMBL:AHX14531.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 320.0
  • Bit_score: 433
  • Evalue 2.00e-118
btuB; TonB-dependent vitamin B12 receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 329.0
  • Bit_score: 374
  • Evalue 4.30e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GGCAGCGCCGACTTCGACAAGGATTTCCTCGCAGGCGACTACGTCGACCGCTACGACACCCGCCGCGCCCTGGCCTCGTTGCAGGCCGACGTCGCCGCGGGCGGCGGCCTGCTGAGCGCCGGCGTCGACTGGCAGCGCGAGGCCGTTTCCAGCAGCACCGTCTACGATGTCGACACGCGCAGCAACCGCGGCCTGTTCGCGCAGTGGCAGCGCAGGTTCGGTGCGCAATCCGTGCAGGCCAGCCTGCGCCGCGACCACAACAGCCAGTTCGGCGGCAAGACCACCGGCAGCCTGTTGTGGGGTTGGGATTTCGCGAAGGACCTGCGCATCACCGCGAGCTGGGGCACGGCGTTCCGCGCACCGACCTTCAACGACCTGTACTACCCCGGCTTCAGCAACCCGAACCTCGCGCCGGAAAGTTCACGCAACGTCGAACTCGGGTTGCGCGGCACGCCCGGGTGGGGACAGTGGTCGCTCGGCGTCTACCGCAACGACATCCACGACCTGATCACCTTCGATGCCGCCACTTTCCGGCCCGCGAACATCGACCGCGCGCGCATCACCGGACTCGAAGGCGTGCTCGGCGGCAAGCTGGCCGGCTGGGACGTGCGCGCGACCGCGACGCTCCTCGACGCTCGCGACGATGCCGCCGGCGGTTTCTACGACGGCAACCAGTTGCCGCGCCGTCCGCGACGCAGCGCGCGCATCGACGCCGACCGCGGCTTCGGCCACTTCAGCTTCGGCGCGAGCTGGTACGTCGCTGCACGCACCTGGGACGACATCGCCAACCGGCATCCACTGGGTGGCTACGCGTTGACCAACCTGCGCGCGGGCTGGCAGTTCCACCGCGACTGGAAACTGCAACTTGCGCTCAACAACGTGTTCGACAAGGACTACGAAACGGCCTGGTATTACAACCAGCCCGGACGCAACTTCATGCTCACGCTTGGGTATTGTCCCTCCGAGTGA
PROTEIN sequence
Length: 323
GSADFDKDFLAGDYVDRYDTRRALASLQADVAAGGGLLSAGVDWQREAVSSSTVYDVDTRSNRGLFAQWQRRFGAQSVQASLRRDHNSQFGGKTTGSLLWGWDFAKDLRITASWGTAFRAPTFNDLYYPGFSNPNLAPESSRNVELGLRGTPGWGQWSLGVYRNDIHDLITFDAATFRPANIDRARITGLEGVLGGKLAGWDVRATATLLDARDDAAGGFYDGNQLPRRPRRSARIDADRGFGHFSFGASWYVAARTWDDIANRHPLGGYALTNLRAGWQFHRDWKLQLALNNVFDKDYETAWYYNQPGRNFMLTLGYCPSE*