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scnpilot_solids1_trim150_scaffold_1575

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1575_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2..451)
DNA (450bp) protein (150aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Guanylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7I7_SPHTD
scnpilot_solids1_trim150_scaffold_1575_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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553..804
DNA (252bp) protein (84aa)
Fibronectin-binding A domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7I6_SPHTD
fibronectin-binding A domain-containing protein
Fibronectin-binding A domain protein {ECO:0000313|EMBL:ACZ37819.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_1575_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(806..3136)
DNA (2331bp) protein (777aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAX8_9GAMM
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin-binding protein 1B
scnpilot_solids1_trim150_scaffold_1575_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3249..3818)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362D40C
Uncharacterized protein {ECO:0000313|EMBL:EIL92312.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3011)
scnpilot_solids1_trim150_scaffold_1575_5
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3898..4221)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003721B8B
Regulatory protein, FmdB family {ECO:0000313|EMBL:KGO98752.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1575_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4356..5003
DNA (648bp) protein (216aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUX7_PSEUU
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADV27976.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1575_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4976..5779)
DNA (804bp) protein (268aa)
putative NAD(P)H dehydrogenase (EC:1.6.5.2); K00355 NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] rbh
Putative NAD(P)H dehydrogenase [quinone] n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTF1_STRMK rbh
NAD(P)H dehydrogenase {ECO:0000313|EMBL:KDP85219.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
scnpilot_solids1_trim150_scaffold_1575_8
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5941..6843
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKL1_BORPD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDP85218.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
LysR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_1575_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6986..8245)
DNA (1260bp) protein (420aa)
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTU4_9GAMM rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL90635.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mechanosensitive ion channel family protein; K16053 miniconductance mechanosensitive channel
scnpilot_solids1_trim150_scaffold_1575_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8550..10013)
DNA (1464bp) protein (488aa)
cobyric acid synthase; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] rbh
Cobyric acid synthase n=2 Tax=Xanthomonas campestris RepID=Q4UXQ6_XANC8 rbh
Cobyric acid synthase {ECO:0000256|SAAS:SAAS00231811}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
scnpilot_solids1_trim150_scaffold_1575_11
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10010..11281)
DNA (1272bp) protein (424aa)
cobyrinic Acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D0487 rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KGM56582.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1575_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11308..12276)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000311F8A8
Ligand-gated channel protein {ECO:0000313|EMBL:AHX14531.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
btuB; TonB-dependent vitamin B12 receptor; K02014 iron complex outermembrane recepter protein
Displaying 12 items

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