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scnpilot_solids1_trim150_scaffold_1277_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 1594..2217

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheW n=1 Tax=Dyella ginsengisoli RepID=UPI0003470995 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 172.0
  • Bit_score: 185
  • Evalue 4.40e-44
Chemotaxis protein CheW {ECO:0000313|EMBL:GAN45286.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 176.0
  • Bit_score: 210
  • Evalue 3.10e-51
chemotaxis signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 172.0
  • Bit_score: 179
  • Evalue 1.30e-42

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGAGCAAGAAGCGCCCCCACGACAGGCACCACCGCGGCGATGAAGCCCGGCAGCAGCCGGTCGCGGAGAACGCGCCCGGCGTGGTGCAGCCCGCGGGCGCGTACGCGCTGCTGGCCGACTACGAAAGCCGCAGCCTCGAGCACGACCCCGGCGTACCCGAACAGATCGAGGCGCCCGGCCTGTGGCGCGCGATCGGTTTCCGGGTCGGCGAACACGACTTCGTCAGCGGCATCGACGAAATCAGCGAAATCCTGATGTCGCCGCCGCCGGTCACCAGCATTCCGTCCACCCGCCCGTGGCTTCTGGGAGTCGCGAACGTGCGCGGCAACCTGATCGCGGTGGTGGACTTGAAGCAGTTCCTGTTCGAGCAGCGTACCCATGTCACCGGCCGCGCGCGCGTGCTGGTGGTGAAGCAGAGCGGCGGCAACGTGGGCCTGCTGGTCGACGAGCTGCTGGGCCAGCGCAACCTGACCGATGCCGATCGTGTGGACGCCGAGGGCGAGGCCGATGCGCGCCTGGCGCGTTTCGTCACCGAGAACGTGACCACCGGGCCCGTTCGGTTGGGCCGCTTCAGCATGCAGGAGTTGACACGCACGCCTGAATTCCAGCACGCGGCTCTGTAG
PROTEIN sequence
Length: 208
MSKKRPHDRHHRGDEARQQPVAENAPGVVQPAGAYALLADYESRSLEHDPGVPEQIEAPGLWRAIGFRVGEHDFVSGIDEISEILMSPPPVTSIPSTRPWLLGVANVRGNLIAVVDLKQFLFEQRTHVTGRARVLVVKQSGGNVGLLVDELLGQRNLTDADRVDAEGEADARLARFVTENVTTGPVRLGRFSMQELTRTPEFQHAAL*