ggKbase home page

scnpilot_solids1_trim150_scaffold_1291_19

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(16695..17114)

Top 3 Functional Annotations

Value Algorithm Source
LCCL domain protein n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XJV7_SYNP2 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 116.0
  • Bit_score: 94
  • Evalue 9.00e-17
LCCL domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 116.0
  • Bit_score: 94
  • Evalue 2.80e-17
LCCL domain protein {ECO:0000313|EMBL:ACA99085.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 116.0
  • Bit_score: 94
  • Evalue 1.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Synechococcus sp. PCC 7002 → Synechococcus → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGAATGCGCTCCGGTCCCTCGCGGTGTTCGCACTTGCGGGCATGCTGGCGAGTTGCCAGCGGGCACACACGGCGCAACCTCCAATGATCGACTGGCGCACCAGCCCGCTGGATCTGAACCTGCGCGGGATGAACGGCAAGAGTTATCTGTTCCGCTGCCCCGCCGGCAAACCGGTGCCGGATTCGGTGGCGGGCAGCGGCGTGTACACGGATGCCTCGTCGATCTGTGCCGCGGCGGCGCACGCGGGCGCAATCGATGCCCAGCAGGGTGGTCCGGTGATGATCCAGATCCTTCCGGGCCAGGGCGATTACCGCGGCAGCACCCGGAACTTCATCCGCAGCACCACCTATCCGCGCGCCTGGGGCGGCAGCTTTGCGGTACTGTCGGCCACGGATTCGGGTGGCGGGAAAAAACCGTGA
PROTEIN sequence
Length: 140
MNALRSLAVFALAGMLASCQRAHTAQPPMIDWRTSPLDLNLRGMNGKSYLFRCPAGKPVPDSVAGSGVYTDASSICAAAAHAGAIDAQQGGPVMIQILPGQGDYRGSTRNFIRSTTYPRAWGGSFAVLSATDSGGGKKP*