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scnpilot_solids1_trim150_scaffold_5380_5

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 3324..3908

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 207.0
  • Bit_score: 103
  • Evalue 8.50e-20
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 207.0
  • Bit_score: 103
  • Evalue 3.80e-19
Probable 2h phosphoesterase (2'-5' rna ligase) protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XWV6_RALSO similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 207.0
  • Bit_score: 103
  • Evalue 2.70e-19

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGACGCCCACGCCGGCCAGCGGCGATCCCGGCAGCCCGCGCTGCTTCCTTGCACTGCTTCCCGATGCCGCCAGCCGCGACGCCCTGCAACGTTGCCGCGAAGTGGCCGCGACTTCGCCGGCCAGCGCGCGCGGCACGCGCTGGGTCGAAGCCGCGGCGCTGCACCTGACCCTGCGTTTCTTCGGGGCGGCCACGAGTGCGCAGGTCGAATACCTCAAGCACATGCTGCCGACGCTGGCGCGCGGCTTGCCGGCACTCTCCGCACGACGTTGCGCGATCTGGCCGAACCGCGCGCGACCGCGGCTGGTGGTGCTGGAGTTCGACCCGCCGGATGCGCTGCTCGCACTCGCGGGGGAATGCGAAACGCTCGCGCAAAAAGCCGGATTCGAGGCGGAGTCGCGTGCCTTCAAGGCGCACCTGACGCTGGCGCGCCTGCGCCCGGGCTGCCTGCCGGAAATTCCACCCGCACCGGCTGCATCGCTCGCCTTCGAATCGCTGGCGCTGATGGTGAGCGACTTGCGCAGCGGCGGCGCAAGCTATCGCAGCCTGGCGAGCGTCGCGTTGCCGGTGCCCGCAAAAACCTGA
PROTEIN sequence
Length: 195
VTPTPASGDPGSPRCFLALLPDAASRDALQRCREVAATSPASARGTRWVEAAALHLTLRFFGAATSAQVEYLKHMLPTLARGLPALSARRCAIWPNRARPRLVVLEFDPPDALLALAGECETLAQKAGFEAESRAFKAHLTLARLRPGCLPEIPPAPAASLAFESLALMVSDLRSGGASYRSLASVALPVPAKT*