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scnpilot_solids1_trim150_scaffold_5380

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5380_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1242
DNA (1242bp) protein (414aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N1_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL96172.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids1_trim150_scaffold_5380_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1316..1981)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTE7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88280.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_5380_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1984..2517)
DNA (534bp) protein (178aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L3_9GAMM
RNA polymerase sigma factor, sigma-70 family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_5380_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2644..3327
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96440.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5380_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3324..3908
DNA (585bp) protein (195aa)
hypothetical protein; K01975 2'-5' RNA ligase [EC:6.5.1.-]
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
Probable 2h phosphoesterase (2'-5' rna ligase) protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XWV6_RALSO
scnpilot_solids1_trim150_scaffold_5380_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4132..4572
DNA (441bp) protein (147aa)
DNA/RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX5_9GAMM
RNA helicase {ECO:0000313|EMBL:AHX12437.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying 6 items

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