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scnpilot_solids1_trim150_scaffold_888

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_888_1
Stenotrophomonas phage Smp131, P2likevirus, Caudovirales, Viruses

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3..395
DNA (393bp) protein (131aa)
Phage baseplate assembly protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRW6_STEMA
Baseplate assembly protein {ECO:0000313|EMBL:AFJ75494.1}; TaxID=1168563 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Peduovirinae; P2likevirus.;" source="Stenotrophomonas phage Smp131.;"
W; Phage baseplate assembly protein; K06903
scnpilot_solids1_trim150_scaffold_888_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

420..1607
DNA (1188bp) protein (396aa)
Tail sheath protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZS53_9PSED rbh
Tail sheath protein {ECO:0000313|EMBL:KJH82854.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
tail sheath protein; K06907 rbh
scnpilot_solids1_trim150_scaffold_888_3
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1649..2158
DNA (510bp) protein (170aa)
major tail tube protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DF1C60
Major tail tube protein {ECO:0000313|EMBL:KFA35275.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola pv. vasculorum NCPPB 1381.;"
phage major tail tube protein; K06908
scnpilot_solids1_trim150_scaffold_888_4
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2255..2578
DNA (324bp) protein (108aa)
Phage tail E family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSI1_POLNA
phage tail E family protein
Phage tail E family protein {ECO:0000313|EMBL:ABM38609.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_888_5
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2587..2700
DNA (114bp) protein (38aa)
P2 GpE family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WC94_9SPHN
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19626.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
scnpilot_solids1_trim150_scaffold_888_6
unknown

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2716..2946
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2965..5793
DNA (2829bp) protein (943aa)
Phage tail tape measure protein, TP901 family,core region n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XHM7_9XANT rbh
T; phage-related tail protein rbh
Tail protein {ECO:0000313|EMBL:KHD60690.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
scnpilot_solids1_trim150_scaffold_888_8
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5801..6211
DNA (411bp) protein (137aa)
Phage protein U n=1 Tax=Xanthomonas citri subsp. citri Aw12879 RepID=M4VVM1_XANCI
Phage protein U
Phage protein U {ECO:0000313|EMBL:CEH83146.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
scnpilot_solids1_trim150_scaffold_888_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..7206
DNA (996bp) protein (332aa)
Putative phage-related protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FIX3_STRMK rbh
D; putative phage-like protein; K06905 rbh
Putative phage-related protein {ECO:0000313|EMBL:CAQ43902.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_888_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..8226)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002554121
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA90245.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
scnpilot_solids1_trim150_scaffold_888_11
unknown

Not on your lists

comp(8327..9052)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI00036BDE6B
scnpilot_solids1_trim150_scaffold_888_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9191..9610)
DNA (420bp) protein (140aa)
Phage-related protein n=1 Tax=Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) RepID=Q8P6H2_XANCP
Putative phage-related protein {ECO:0000313|EMBL:EZP46988.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Z2969; hypothetical protein
scnpilot_solids1_trim150_scaffold_888_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9685..9891
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Pseudomonas syringae pv. actinidiae RepID=S6LWH1_PSESF
Phage-associated protein, BcepMu gp16 family {ECO:0000313|EMBL:EZP46989.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_888_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9888..10241
DNA (354bp) protein (118aa)
transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI000395661F
transcriptional activator Ogr/delta
Transcriptional activator Ogr/delta {ECO:0000313|EMBL:AEF91382.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_solids1_trim150_scaffold_888_15
unknown

Not on your lists

10238..10576
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10648..13305
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Edwardsiella ictaluri (strain 93-146) RepID=C5BEQ9_EDWI9 rbh
Toprim domain protein {ECO:0000313|EMBL:AIU27221.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_888_17
unknown

Not on your lists

13375..13872
DNA (498bp) protein (166aa)
Hypothetical Protein
scnpilot_solids1_trim150_scaffold_888_18
unknown

Not on your lists

13865..14038
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14035..14328
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J159_COMT2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY33748.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
scnpilot_solids1_trim150_scaffold_888_20
unknown

Not on your lists

14321..14734
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_21
unknown

Not on your lists

14727..14915
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_22
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14908..16698
DNA (1791bp) protein (597aa)
C-5 cytosine-specific DNA methylase n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T1N7_9XANT rbh
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:EFF49385.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
C-5 cytosine-specific DNA methylase rbh
scnpilot_solids1_trim150_scaffold_888_23
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16691..16903
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=M4TVR6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EZP47002.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Hypothetical protein
scnpilot_solids1_trim150_scaffold_888_24
unknown

Not on your lists

16900..17070
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_888_25
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17080..18618
DNA (1539bp) protein (513aa)
Resolvase domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTB1_SIDLE
resolvase
Resolvase domain protein {ECO:0000313|EMBL:ADE12197.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
scnpilot_solids1_trim150_scaffold_888_trna_1
unknown

Not on your lists

comp(18578..18651)
DNA (74bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_888_26
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18765..19175)
DNA (411bp) protein (137aa)
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Protein CrcB homolog id=2543331 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
camphor resistance protein CrcB; K06199 CrcB protein
scnpilot_solids1_trim150_scaffold_888_27
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19185..19454)
DNA (270bp) protein (90aa)
ATPase AAA n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B37CB8
ATPase; K07478 putative ATPase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying 28 items

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