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scnpilot_solids1_trim150_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_244_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1794)
DNA (1794bp) protein (598aa)
ornithine decarboxylase (EC:4.1.1.17); K01581 ornithine decarboxylase [EC:4.1.1.17]
lysine decarboxylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003705A7E
Ornithine decarboxylase {ECO:0000313|EMBL:GAD21439.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_244_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1936..2373
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00420.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_244_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2406..3329
DNA (924bp) protein (308aa)
SPFH domain, Band 7 family protein n=2 Tax=Acidovorax RepID=A1W9I0_ACISJ rbh
hypothetical protein rbh
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ABM42905.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_244_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3378..3944
DNA (567bp) protein (189aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] rbh
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ACM32657.1}; EC=2.7.8.5 {ECO:0000313|EMBL:ACM32657.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG66_ACIET rbh
scnpilot_solids1_trim150_scaffold_244_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4174..4446
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein n=2 Tax=Acidovorax RepID=A1W953_ACISJ
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACM32658.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_244_trna_1
unknown

Not on your lists

4463..4535
DNA (73bp)
transferRNA Val
scnpilot_solids1_trim150_scaffold_244_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4601..6523
DNA (1923bp) protein (641aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ppic-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] rbh
peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003757CD9 rbh
scnpilot_solids1_trim150_scaffold_244_trna_2
unknown

Not on your lists

6571..6643
DNA (73bp)
transferRNA His
scnpilot_solids1_trim150_scaffold_244_7
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6672..7820)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000377A730 rbh
Phage integrase family protein {ECO:0000313|EMBL:AIO67648.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
putative phage integrase, Bbp50 rbh
scnpilot_solids1_trim150_scaffold_244_8
Bordetella phage BPP-1, Bppunalikevirus, Caudovirales, Viruses

Not on your lists

comp(8016..9407)
DNA (1392bp) protein (464aa)
Bbp47 n=1 Tax=Bordetella phage BPP-1 RepID=Q774Z8_BPBPP rbh
Bbp47 {ECO:0000313|EMBL:AAR97712.1}; TaxID=194699 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Bordetella phage BPP-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_244_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9404..9730)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034DAC23
Bbp43 {ECO:0000313|EMBL:EIK88860.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
VRR-NUC domain-containing protein
scnpilot_solids1_trim150_scaffold_244_10
unknown

Not on your lists

comp(9727..9867)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_11
unknown

Not on your lists

comp(9886..10536)
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_12
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10538..12631)
DNA (2094bp) protein (698aa)
DNA polymerase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] rbh
Putative phage DNA polymerase, protein p42 n=1 Tax=blood disease bacterium R229 RepID=G2ZK22_9RALS rbh
Putative phage DNA polymerase, protein p42 {ECO:0000313|EMBL:CCA79385.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
scnpilot_solids1_trim150_scaffold_244_13
Bordetella phage BPP-1, Bppunalikevirus, Caudovirales, Viruses

Not on your lists

comp(13148..13696)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C5FDE
Bbp40 {ECO:0000313|EMBL:AAR97705.1}; TaxID=194699 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Bordetella phage BPP-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_244_14
unknown

Not on your lists

comp(13693..13881)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_15
Bordetella phage BPP-1, Bppunalikevirus, Caudovirales, Viruses

Not on your lists

comp(13878..15134)
DNA (1257bp) protein (419aa)
hypothetical protein BIP-1p37 n=1 Tax=Bordetella phage BIP-1 RepID=UPI000034ED1E rbh
Bbp38 {ECO:0000313|EMBL:AAR97703.1}; TaxID=194699 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Bordetella phage BPP-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_244_16
Bordetella phage BPP-1, Bppunalikevirus, Caudovirales, Viruses

Not on your lists

comp(15131..15562)
DNA (432bp) protein (144aa)
Bbp35 n=1 Tax=Bordetella phage BPP-1 RepID=Q775B0_BPBPP
Bbp35 {ECO:0000313|EMBL:AAR97700.1}; TaxID=194699 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Bordetella phage BPP-1.;"
scnpilot_solids1_trim150_scaffold_244_17
unknown

Not on your lists

comp(15573..15962)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_18
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15959..16624)
DNA (666bp) protein (222aa)
Polymer-forming cytoskeletal n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NCS8_9PAST
Uncharacterized protein {ECO:0000313|EMBL:EFL81062.1}; TaxID=754256 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumoniae serovar 6 str. Femo.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_244_19
unknown

Not on your lists

comp(16621..16752)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_20
unknown

Not on your lists

comp(16956..17267)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000365F6AC
scnpilot_solids1_trim150_scaffold_244_21
unknown

Not on your lists

comp(17300..17782)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_22
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17779..18420)
DNA (642bp) protein (214aa)
Helix-turn-helix motif:Peptidase S24, S26A and S26B n=1 Tax=Burkholderia pseudomallei (strain 668) RepID=A3NLY9_BURP6
peptidase
Helix-turn-helix motif:Peptidase S24, S26A and S26B {ECO:0000313|EMBL:ABN87079.1}; TaxID=320373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 668).;"
scnpilot_solids1_trim150_scaffold_244_23
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18501..18737
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TPM4_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32912.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_244_24
unknown

Not on your lists

18730..18894
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_25
unknown

Not on your lists

18887..19108
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_244_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19105..19803
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D5D206
HNH endonuclease family protein {ECO:0000313|EMBL:KFJ10299.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_244_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19807..20085
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000367FFE4
Uncharacterized protein {ECO:0000313|EMBL:KFJ11691.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_244_28
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20082..22154
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MHY3_BORPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCJ49564.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
Displaying items 1-30 of 65 in total

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