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scnpilot_solids1_trim150_scaffold_108_40

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 34603..35187

Top 3 Functional Annotations

Value Algorithm Source
ECF-type sigma factor n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5F9_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 133
  • Evalue 2.40e-28
ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 133
  • Evalue 7.70e-29
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 194.0
  • Bit_score: 181
  • Evalue 1.40e-42

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Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGATTATGACGAAGAGGCTGCCGAAGCGCGCCGGCGAGCGGAGCCTGCATTTCAGATCGAAATCGATGACTGGGGCAACCAGCATAAGTCTGCGGCTATCGAAGCCATGTATCAAGAGCACCAGCCGCAACTTTCCCGTTTCCTGCGCCGACGGACGAATTCACAGGATGTCGGGGATCTGGTCCAGGAGTGCTTCCAACGCCTTGCCGCAAGCGGCGCGGATATTGTGTCGCGGATCGAAAAGCCCGGAGCCTATTTGGCACGAGCGGCACGCAACCTGCTCATCGAACGTGCCCATGTCGACCGGCGTCGCTTCGCCTCGGCACATCATGAATATGACGATACCGAGCATCCAGGGTCCGACCCCCACGCCGCGCTCGAAGCAAGGGACATGATGCGCCGTGTCGAGGACCGTCTCGAACGCCTGAAACCGAAAACCCGCGACATCTTCCTGATGCACCGGTTCGAGGGTATGTCCTATGCCGAAATTGCGGCTGCAACAGGAATGAGCGAGAAGGGCGTGGAAAAGCAAATCGCCAAGGCCATGACGGCAATCCTTCGCGTAAAAGGTCCGCGGTCATGA
PROTEIN sequence
Length: 195
MDYDEEAAEARRRAEPAFQIEIDDWGNQHKSAAIEAMYQEHQPQLSRFLRRRTNSQDVGDLVQECFQRLAASGADIVSRIEKPGAYLARAARNLLIERAHVDRRRFASAHHEYDDTEHPGSDPHAALEARDMMRRVEDRLERLKPKTRDIFLMHRFEGMSYAEIAAATGMSEKGVEKQIAKAMTAILRVKGPRS*