ggKbase home page

scnpilot_solids1_trim150_scaffold_108_41

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 35184..36146

Top 3 Functional Annotations

Value Algorithm Source
FecR/PupR family sigma factor regulatory protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B248 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 337.0
  • Bit_score: 188
  • Evalue 8.10e-45
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 335.0
  • Bit_score: 136
  • Evalue 1.50e-29
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 320.0
  • Bit_score: 262
  • Evalue 8.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAGCCGCGAGATACAAGCGGGAAAATGGTTCGCGCGCATGCGCGCGAGCGATGCGGCGGCTGATCGCGCGAAGTTCGATGCGTGGATGGCCGATCCCGAAAATGCCGCGGCCTATGCCGAGGCGGAAAAGCGCTGGGCGGCTCTCGATGTGAATGTCGCGGGCCGGATCAGGGCGCGTGCGCTGCGCCCTTCCGGATCAAACCGGCTACGCTGGGCAACGGCTTTCCTGCTCGTCGTCATGCTTGCCCTCGGAGGCGCCTGGTATGCCGGGCGTGCCGGGACCGGTCCGCAAATCGCGACCCGGTCCGTCGAGGGCGAAGCCGTTCGGCTGGTCGACGGCACATTGGTTGAACTCCTCGACGGAGCGAAGATCGAGACCAGATTTTCGGAGCGTGACAGGGAGGTCGTCATGACCGGCGGCCGTGCCCGTTTCACCGTAGCGCACGATGCCTCCCGGCCCTTTCGTGTCATCGCCGGGGGATCCGAAATTGTCGCACTCGGCACCATCTTCGAAGTCGATCTGACACGACGCAATCCGAGCGTCCGGCTGGTCAGCGGCTCTGTCGATGTGCGGGCGACAGCGCCCGGCGGACGCACGGTCAGACTGAACCCCGGCGACACGGTCGAGGTACAGGGCGGCGAACCGCTTCATCTGCCGCGCGGCGACGCCGCTCGGTCGACGCCCGACACGGCAATGACGCTACCCGTGGCAAACGTCCAACCGACATCTCGGGTCGTCGCCGACAAGTTGCCGCTCAGCGAGGTCATCGATCAAGCGAACCGGGTGAACAGCAAGTCAATCCGGCTGGCTGACCCCGCGCTCGGATCGCTTGAGGTCACGGGCCGGTTCGATGTCACCGACAGCGCGTCGCTCGCGCGAAAACTCAGCGCGGTTTTCGGACTTTCGGCCCAAGAGAGTGACGGCGCCATCATCCTGTCCCGAAAAAAAACGGGGGGATAA
PROTEIN sequence
Length: 321
MSREIQAGKWFARMRASDAAADRAKFDAWMADPENAAAYAEAEKRWAALDVNVAGRIRARALRPSGSNRLRWATAFLLVVMLALGGAWYAGRAGTGPQIATRSVEGEAVRLVDGTLVELLDGAKIETRFSERDREVVMTGGRARFTVAHDASRPFRVIAGGSEIVALGTIFEVDLTRRNPSVRLVSGSVDVRATAPGGRTVRLNPGDTVEVQGGEPLHLPRGDAARSTPDTAMTLPVANVQPTSRVVADKLPLSEVIDQANRVNSKSIRLADPALGSLEVTGRFDVTDSASLARKLSAVFGLSAQESDGAIILSRKKTGG*