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scnpilot_solids1_trim150_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_444_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_444_2
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(583..1245)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003692264 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXI79874.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_444_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1247..2530)
DNA (1284bp) protein (428aa)
UMUC domain protein DNA-repair protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH64_NITSI
DNA polymerase V subunit UmuC {ECO:0000313|EMBL:GAO36708.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
UMUC domain-containing protein DNA-repair protein; K03502 DNA polymerase V
scnpilot_solids1_trim150_scaffold_444_4
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2511..3098)
DNA (588bp) protein (196aa)
DNA repair protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003790B3B
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:AGS39713.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
scnpilot_solids1_trim150_scaffold_444_5
unknown

Not on your lists

3202..4215
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036A5DDC
scnpilot_solids1_trim150_scaffold_444_6
unknown

Not on your lists

4302..5396
DNA (1095bp) protein (365aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_444_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5404..6519
DNA (1116bp) protein (372aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC id=12497051 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
tyrosine recombinase XerC; K03733 integrase/recombinase XerC
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6591..7022
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB7BA
XRE family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_444_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7158..7367
DNA (210bp) protein (70aa)
transcriptional regulator n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037D9B6F
putative transcription regulator protein
Probable transcription regulator protein {ECO:0000313|EMBL:CAD15134.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
scnpilot_solids1_trim150_scaffold_444_10
unknown

Not on your lists

7364..7657
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_444_11
unknown

Not on your lists

7890..8138
DNA (249bp) protein (83aa)
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_444_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8139..11003)
DNA (2865bp) protein (955aa)
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG id=12497060 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11007..12473)
DNA (1467bp) protein (489aa)
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH id=12497061 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12488..13303)
DNA (816bp) protein (272aa)
hypothetical protein id=12497062 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein; K12057 conjugal transfer pilus assembly protein TraF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13300..13704)
DNA (405bp) protein (135aa)
hypothetical protein id=1311310 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_16
unknown

Not on your lists

comp(13701..14501)
DNA (801bp) protein (267aa)
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_444_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14506..15813)
DNA (1308bp) protein (436aa)
Conjugal transfer mating pair stabilization protein TraN id=1311309 bin=GWE1_T_denit_62_9 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15810..16916)
DNA (1107bp) protein (369aa)
id=12497066 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16913..17602)
DNA (690bp) protein (230aa)
hypothetical protein id=12497067 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17605..18621)
DNA (1017bp) protein (339aa)
Similar to plasmid-like sex pilus assembly and synthesis protein traU id=1311306 bin=GWE1_T_denit_62_9 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_21
Edwardsiella ictaluri, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18618..19346)
DNA (729bp) protein (243aa)
hypothetical protein id=12497069 bin=THIO_MID species=Edwardsiella ictaluri genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR67577.1}; TaxID=634503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella ictaluri (strain 93-146).;"
scnpilot_solids1_trim150_scaffold_444_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19359..19973)
DNA (615bp) protein (205aa)
type-F conjugative transfer system protein TraW; K12061 conjugal transfer pilus assembly protein TraW id=12497070 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
membrane lipoprotein lipid attachment site; K12061 conjugal transfer pilus assembly protein TraW
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_23
unknown

Not on your lists

comp(19986..20393)
DNA (408bp) protein (136aa)
id=12497071 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_444_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20410..20955)
DNA (546bp) protein (182aa)
signal peptidase I (EC:3.4.21.89); K12062 conjugal transfer pilin signal peptidase TrbI
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI id=12497072 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_444_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20952..21380)
DNA (429bp) protein (143aa)
hypothetical protein id=12497073 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21377..23950)
DNA (2574bp) protein (858aa)
protein TraC; K12063 conjugal transfer ATP-binding protein TraC id=12497074 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
protein TraC; K12063 conjugal transfer ATP-binding protein TraC rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23947..24528)
DNA (582bp) protein (194aa)
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV id=12497075 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
membrane lipoprotein lipid attachment site; K12064 conjugal transfer pilus assembly protein TraV
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24525..25325)
DNA (801bp) protein (267aa)
disulfide bond isomerase, DsbC/G; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
hypothetical protein id=12497076 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25343..26581)
DNA (1239bp) protein (413aa)
protein TraB; K12065 conjugal transfer pilus assembly protein TraB id=12497077 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
protein TraB; K12065 conjugal transfer pilus assembly protein TraB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_444_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26581..27324)
DNA (744bp) protein (248aa)
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK id=12497078 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 89 in total

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