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scnpilot_solids1_trim150_scaffold_678_curated

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_678_curated_31
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35958..36614)
DNA (657bp) protein (219aa)
Chloramphenicol acetyltransferase {ECO:0000256|RuleBase:RU000503}; EC=2.3.1.28 {ECO:0000256|RuleBase:RU000503};; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
Chloramphenicol acetyltransferase (CAT) (EC:2.3.1.28)
chloramphenicol acetyltransferase n=1 Tax=Streptomyces RepID=UPI0003807C4F
scnpilot_solids1_trim150_scaffold_678_curated_32
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36690..37583
DNA (894bp) protein (298aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE5A
scnpilot_solids1_trim150_scaffold_678_curated_33
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37616..38767
DNA (1152bp) protein (384aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADP79324.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADP79324.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Acetyl-CoA acetyltransferase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J2F2_FRASU
scnpilot_solids1_trim150_scaffold_678_curated_34
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38955..40202
DNA (1248bp) protein (416aa)
ABC transporter substrate-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003660DF4
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:CCI52094.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
putative ABC transporter substrate-binding protein
scnpilot_solids1_trim150_scaffold_678_curated_35
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40216..41124
DNA (909bp) protein (303aa)
ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W384_9ACTO
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGZ42460.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_678_curated_36
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41141..42031
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMD0_BIFBR
Putative permease of ABC transporter {ECO:0000313|EMBL:CCH78726.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
Permease protein of ABC transporter system
scnpilot_solids1_trim150_scaffold_678_curated_37
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42028..43110
DNA (1083bp) protein (361aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003758346
ABC-type spermidine/putrescine transport system, ATPase component
scnpilot_solids1_trim150_scaffold_678_curated_38
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43314..44852
DNA (1539bp) protein (513aa)
amino acid permease n=1 Tax=Brevibacterium linens RepID=UPI000050F7D9
Putative amino acid permease YhdG {ECO:0000313|EMBL:KJL32517.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amino acid permease-associated protein
scnpilot_solids1_trim150_scaffold_678_curated_39
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44879..45700
DNA (822bp) protein (274aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV7_NOCSJ
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABL82092.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_678_curated_40
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45697..47079
DNA (1383bp) protein (461aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
L-glutamine synthetase {ECO:0000313|EMBL:ABL82091.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ABL82091.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
L-glutamine synthetase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV6_NOCSJ
scnpilot_solids1_trim150_scaffold_678_curated_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47150..48577
DNA (1428bp) protein (476aa)
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:KJL26473.1}; EC=1.2.1.39 {ECO:0000313|EMBL:KJL26473.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8]
Betaine-aldehyde dehydrogenase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV5_NOCSJ
scnpilot_solids1_trim150_scaffold_678_curated_42
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48764..49534
DNA (771bp) protein (257aa)
short-chain dehydrogenase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E5DFD
Putative oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:CCH80511.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_678_curated_43
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49634..50335
DNA (702bp) protein (234aa)
Peptidase C26 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV3_NOCSJ
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:ABL82088.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_678_curated_44
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50510..52231
DNA (1722bp) protein (574aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5Z2_CELGA
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEI11007.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
scnpilot_solids1_trim150_scaffold_678_curated_45
Mycobacterium liflandii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52205..54877)
DNA (2673bp) protein (891aa)
metal cation transporter p-type ATPase a (EC:3.6.3.-)
Metal cation transporter p-type ATPase a {ECO:0000313|EMBL:AGC63474.1}; EC=3.6.3.- {ECO:0000313|EMBL:AGC63474.1};; TaxID=459424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium liflandii (strain 128FXT).;"
Metal cation transporter p-type ATPase a n=1 Tax=Mycobacterium liflandii (strain 128FXT) RepID=L7VDI1_MYCL1
scnpilot_solids1_trim150_scaffold_678_curated_46
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55404..55658
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQ51_9MICO
Uncharacterized protein {ECO:0000313|EMBL:AIY15785.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Rv0623-like transcription factor
scnpilot_solids1_trim150_scaffold_678_curated_47
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55655..56047
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=611302 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis T46.;"
VapC ribonuclease Mb0625 n=57 Tax=Mycobacterium tuberculosis complex RepID=VAPC1_MYCBO
hypothetical protein
scnpilot_solids1_trim150_scaffold_678_curated_48
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56189..58519
DNA (2331bp) protein (777aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ACV77064.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACV77064.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
DNA polymerase III, subunits gamma and tau n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X888_NAKMY
scnpilot_solids1_trim150_scaffold_678_curated_49
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58562..59875)
DNA (1314bp) protein (438aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Serine hydroxymethyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X896_NAKMY
scnpilot_solids1_trim150_scaffold_678_curated_50
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59982..60683)
DNA (702bp) protein (234aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Cell wall hydrolase/autolysin n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8B0_NAKMY
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:ACV77086.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_51
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60709..61464
DNA (756bp) protein (252aa)
Nucleoid-associated protein Kfla_0408 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUL4_KRIFD
hypothetical protein; K09747 hypothetical protein
Nucleoid-associated protein Kfla_0408 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids1_trim150_scaffold_678_curated_52
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61498..62076
DNA (579bp) protein (193aa)
Recombination protein RecR n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8B2_NAKMY
recombination protein RecR; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_53
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62086..62808
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G7D0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHY89325.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
uridine kinase
scnpilot_solids1_trim150_scaffold_678_curated_54
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62984..64237
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8C4_NAKMY
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77100.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_55
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64304..65575)
DNA (1272bp) protein (424aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8C6_NAKMY
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77102.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_56
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(65539..66330)
DNA (792bp) protein (264aa)
DNA glycosylase/AP lyase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA glycosylase/AP lyase, H2TH DNA-binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6E5_NAKMY
DNA glycosylase/AP lyase, H2TH DNA-binding {ECO:0000313|EMBL:ACV78800.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_678_curated_57
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(66422..66874)
DNA (453bp) protein (151aa)
Ribonuclease VapC n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAU1_9RHOB
PIN domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
scnpilot_solids1_trim150_scaffold_678_curated_58
unknown

Not on your lists

comp(66888..67142)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_678_curated_59
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67204..68307
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q0J5_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33795.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids1_trim150_scaffold_678_curated_60
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68371..69345)
DNA (975bp) protein (325aa)
Fatty acid desaturase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X605_NAKMY
Delta fatty acid desaturase {ECO:0000313|EMBL:EYR62018.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
fatty acid desaturase
Displaying items 31-60 of 76 in total

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