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scnpilot_solids1_trim150_scaffold_678_curated_47

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 55655..56047

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=611302 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis T46.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 130.0
  • Bit_score: 164
  • Evalue 1.20e-37
VapC ribonuclease Mb0625 n=57 Tax=Mycobacterium tuberculosis complex RepID=VAPC1_MYCBO similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 130.0
  • Bit_score: 164
  • Evalue 8.70e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 130.0
  • Bit_score: 164
  • Evalue 2.70e-38

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Taxonomy

Mycobacterium tuberculosis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGATCGTGGAAACGTCTGCTCTCGTCGCCATGGCGTTGAACGAGCCCGAGTGCGAGTTGTTCACGAGCGCGATCGAGGCAGCGGACGTTCGCAGCATGTCTGCCGCCAGCTATGTGGAGGCCGGCGTCGTGCTGGACAGTCGGCGCAATGCCGCGCTGTCGCGGCAACTTGACGGCTTGCTGATCGATCTCGACATTCGCATCGAGCCCGTCACTGAGGCGCAGGCGATGATCGCGCGAGCCGCCTATCGGGACTTCGGCCGTGGCAGCGGGCATCCGGCGAAGCTCAATTTCGGCGACTGCCTCTCCTATGCGCTGGCCAAGGACAAGCGCGAGCCGCTGCTCTACAAGGGCAACGACTTCGTGCACACCGACATTCAGGCGGCGATATAG
PROTEIN sequence
Length: 131
MIVETSALVAMALNEPECELFTSAIEAADVRSMSAASYVEAGVVLDSRRNAALSRQLDGLLIDLDIRIEPVTEAQAMIARAAYRDFGRGSGHPAKLNFGDCLSYALAKDKREPLLYKGNDFVHTDIQAAI*