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scnpilot_solids1_trim150_scaffold_428_curated_7

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(3360..3689)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7G8_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 108.0
  • Bit_score: 198
  • Evalue 3.50e-48
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 108.0
  • Bit_score: 198
  • Evalue 1.10e-48
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACZ91489.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 108.0
  • Bit_score: 198
  • Evalue 4.90e-48

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
GTGGGCAAGCAGGCGACGGAGATGCTCAAAGGCATCCTGGAGGGCATCGTGCTGGCCATCCTCTCCGGACGGCCCGCCTACGGCTACGAGATCACCGCATGGCTGCGCGACCAGGGCTTCTCCGACATAGCCGAGGGCACCATCTACGCCGTACTGGTCCGCGCCGAGCAGCGCGGCCTGGTCGACGTGCAGAAGGTCCCGTCCGAAAAGGGGCCGCCGCGCAAGGTGTATTCGCTCAACGCCGAGGGCCGGGAGTACCTCGACGAATTCTGGAAGACCTGGAGCTTTCTGGCCGCACGCCTGGCCGAGCTCCGCGGAGGAGGAATGTGA
PROTEIN sequence
Length: 110
VGKQATEMLKGILEGIVLAILSGRPAYGYEITAWLRDQGFSDIAEGTIYAVLVRAEQRGLVDVQKVPSEKGPPRKVYSLNAEGREYLDEFWKTWSFLAARLAELRGGGM*