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scnpilot_solids1_trim150_scaffold_428_curated

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_428_curated_1
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..317
DNA (315bp) protein (105aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47B1F
Luciferase-Like Monooxygenase {ECO:0000313|EMBL:CQR62591.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
oxidoreductase
scnpilot_solids1_trim150_scaffold_428_curated_2
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

338..958
DNA (621bp) protein (207aa)
NADPH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
NADPH-dependent FMN reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48604
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KDS89104.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
scnpilot_solids1_trim150_scaffold_428_curated_3
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

955..1431
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D63F5
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AFV90901.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_solids1_trim150_scaffold_428_curated_4
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1459..2217)
DNA (759bp) protein (253aa)
ABC-2 type transporter n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F430_VERMA
ABC-type transporter, permease subunit
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_solids1_trim150_scaffold_428_curated_5
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2214..2993)
DNA (780bp) protein (260aa)
ABC transporter n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4B6A6
Glycosyl transferase family 8 {ECO:0000313|EMBL:KFD44252.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
antibiotic transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_428_curated_6
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2990..3358)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00035F7D5F
Uncharacterized protein {ECO:0000313|EMBL:ELT45676.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_428_curated_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3360..3689)
DNA (330bp) protein (110aa)
Transcriptional regulator, PadR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7G8_STRRD
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACZ91489.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids1_trim150_scaffold_428_curated_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3830..5095)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036F5AB0
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL32783.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_428_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5092..5676)
DNA (585bp) protein (195aa)
ArsR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B50790
Helix-turn-helix domain protein {ECO:0000313|EMBL:KJL24909.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_428_curated_10
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5867..6514)
DNA (648bp) protein (216aa)
Putative fructose transport system kinase n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UXB4_TSUPD
fructose transporter kinase
Putative fructose transport system kinase {ECO:0000313|EMBL:ADG80133.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
scnpilot_solids1_trim150_scaffold_428_curated_11
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6589..6963
DNA (375bp) protein (125aa)
PadR family transcriptional regulator n=1 Tax=Rhodococcus RepID=UPI00029AF581
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ETT23729.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_428_curated_12
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6963..8306
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2YC23_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME59145.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_428_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8411..8977)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XI44_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78413.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_428_curated_14
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9022..9996)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EI76_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF41183.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids1_trim150_scaffold_428_curated_15
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10026..10394)
DNA (369bp) protein (123aa)
Putative ArsR family transcriptional regulator n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX25_9ACTN
putative ArsR family transcriptional regulator
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:BAN00741.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
scnpilot_solids1_trim150_scaffold_428_curated_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10632..11603
DNA (972bp) protein (324aa)
Cation diffusion facilitator family transporter n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6V1_NAKMY
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV80849.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_428_curated_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11615..12979)
DNA (1365bp) protein (455aa)
membrane protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D70029
Membrane protein {ECO:0000313|EMBL:KDA05679.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
permease of the major facilitator superfamily; K08369 MFS transporter, putative metabolite:H+ symporter
scnpilot_solids1_trim150_scaffold_428_curated_18
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13048..13524)
DNA (477bp) protein (159aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKT0_9CHLR
AhpD family alkylhydroperoxidase like protein
scnpilot_solids1_trim150_scaffold_428_curated_19
unknown

Not on your lists

comp(13606..13890)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_428_curated_20
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14086..14583
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Mycobacterium indicus pranii MTCC 9506 RepID=J9WQC3_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC46057.1}; TaxID=487521 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384; / NCTC 13025 / 3600).;"
scnpilot_solids1_trim150_scaffold_428_curated_21
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14777..15784
DNA (1008bp) protein (336aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GA10_9PSEU
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHY88537.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
scnpilot_solids1_trim150_scaffold_428_curated_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15858..17681)
DNA (1824bp) protein (608aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6V5_NAKMY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACV80853.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_428_curated_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17773..18762)
DNA (990bp) protein (330aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5P4_CONWI
magnesium and cobalt transporter CorA; K03284 magnesium transporter
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_428_curated_24
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18897..19520)
DNA (624bp) protein (208aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1852.;"
Superoxide dismutase n=4 Tax=Propionibacterium RepID=S3X6S0_9ACTO
superoxide dismutase
scnpilot_solids1_trim150_scaffold_428_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19721..21583)
DNA (1863bp) protein (621aa)
Glycosyl transferase family 39 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6U6_NAKMY
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ACV80844.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_428_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21598..22446
DNA (849bp) protein (283aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6U5_NAKMY
scnpilot_solids1_trim150_scaffold_428_curated_27
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22504..23331
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BUR4_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI03255.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
scnpilot_solids1_trim150_scaffold_428_curated_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23428..23904
DNA (477bp) protein (159aa)
GatB/YqeY n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6U4_NAKMY
GatB/YqeY; K09117 hypothetical protein
GatB/YqeY {ECO:0000313|EMBL:ACV80842.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_428_curated_29
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23991..25628)
DNA (1638bp) protein (546aa)
fadE9; acyl-CoA dehydrogenase (EC:1.3.99.-); K09456 putative acyl-CoA dehydrogenase
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI000310A1F5
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:KHS52498.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
scnpilot_solids1_trim150_scaffold_428_curated_30
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25643..27145
DNA (1503bp) protein (501aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase n=1 Tax=Rhodococcus opacus RepID=UPI00029CCCFF
Displaying items 1-30 of 111 in total

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