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scnpilot_solids1_trim150_scaffold_4445_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4445_curated_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..381
DNA (381bp) protein (127aa)
glutamate--tRNA ligase (EC:6.1.1.17); K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJA1_ACIET
scnpilot_solids1_trim150_scaffold_4445_curated_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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336..1094
DNA (759bp) protein (253aa)
trmB; tRNA (guanine-n(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJA0_ACIET
scnpilot_solids1_trim150_scaffold_4445_curated_3
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1202..4081
DNA (2880bp) protein (960aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B1Q1_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD63789.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_4445_curated_4
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4093..4446
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00037BC5BC
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Transcriptional regulator, ArsR family-like protein {ECO:0000313|EMBL:AEG92461.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_solids1_trim150_scaffold_4445_curated_5
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4536..5453)
DNA (918bp) protein (306aa)
Peptidase family M48 n=1 Tax=Acidovorax sp. CF316 RepID=J0K8H0_9BURK
Peptidase family M48 {ECO:0000313|EMBL:EJE49890.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TPR repeat-containing Zn-dependent protease
scnpilot_solids1_trim150_scaffold_4445_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5450..5965)
DNA (516bp) protein (172aa)
SH3 type 3 domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D9_ACIDE
SH3 type 3 domain protein {ECO:0000313|EMBL:EER59614.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SH3 type 3 domain protein
scnpilot_solids1_trim150_scaffold_4445_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5962..7887)
DNA (1926bp) protein (642aa)
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1]
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7E0_ACIDE
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:EER59615.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_4445_curated_8
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8113..9405
DNA (1293bp) protein (431aa)
GGDEF domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4V0_9BURK
GGDEF domain-containing protein {ECO:0000313|EMBL:EHL20329.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
signal protein
scnpilot_solids1_trim150_scaffold_4445_curated_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9420..10154)
DNA (735bp) protein (245aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX65_RAMTT
scnpilot_solids1_trim150_scaffold_4445_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10223..11647
DNA (1425bp) protein (475aa)
cardiolipin synthetase 2 (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-]
cardiolipin synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E3918
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes {ECO:0000313|EMBL:GAD23722.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_4445_curated_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11638..12339)
DNA (702bp) protein (234aa)
ABC transporter related protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W858_ACISJ
ABC transporter {ECO:0000313|EMBL:KJA12198.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_4445_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12353..12994
DNA (642bp) protein (214aa)
Arylesterase (EC:3.1.1.2); K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5]
Arylesterase {ECO:0000313|EMBL:AEB85208.1}; EC=3.1.1.2 {ECO:0000313|EMBL:AEB85208.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Arylesterase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR3_ALIDB
scnpilot_solids1_trim150_scaffold_4445_curated_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13039..13356)
DNA (318bp) protein (106aa)
cys/met metabolism pyridoxal-phosphate-dependent protein; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR5_ALIDB
Cystathionine beta-lyase {ECO:0000313|EMBL:GAO23007.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 13 items

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