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scnpilot_solids1_trim150_scaffold_2754_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2754_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..725)
DNA (723bp) protein (241aa)
DSBA oxidoreductase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE25_RALP1
Protein-disulfide isomerase {ECO:0000313|EMBL:GAO21719.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
DSBA oxidoreductase
scnpilot_solids1_trim150_scaffold_2754_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(737..3640)
DNA (2904bp) protein (968aa)
Conjugative transfer ATPase, PFL_4706 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G755_ALIDK
Type IV secretory pathway, VirB4 components {ECO:0000313|EMBL:GAO21718.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugative transfer ATPase
scnpilot_solids1_trim150_scaffold_2754_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3640..4077)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE23_RALP1
Lipoprotein {ECO:0000313|EMBL:GAO21717.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4058..5527)
DNA (1470bp) protein (490aa)
Integrating conjugative element protein, PFL_4705 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G753_ALIDK
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21716.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
integrating conjugative element protein
scnpilot_solids1_trim150_scaffold_2754_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5517..6449)
DNA (933bp) protein (311aa)
Integrating conjugative element protein, PFL_4704 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5CJN3_9BURK
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21715.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6446..7147)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE20_RALP1
Putative exported protein {ECO:0000313|EMBL:GAO21714.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7144..7629)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE19_RALP1
Conjugative transfer region protein {ECO:0000313|EMBL:GAO21713.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7642..8034)
DNA (393bp) protein (131aa)
Integrating conjugative element membrane protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QMR3_PSECO
Integrating conjugative element membrane protein {ECO:0000313|EMBL:GAO21712.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..8297)
DNA (240bp) protein (80aa)
Integrating conjugative element protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QU47_RALPI
Integrating conjugative element protein {ECO:0000313|EMBL:AGW91602.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_10
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8294..8683)
DNA (390bp) protein (130aa)
Integrative conjugative element protein, RAQPRD family n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QNA4_RALPI
Integrative conjugative element protein, RAQPRD family {ECO:0000313|EMBL:AGW91603.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_11
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..9300
DNA (327bp) protein (109aa)
Putative DNA-binding protein n=2 Tax=Bordetella bronchiseptica RepID=K4QNR2_BORBO
Transcriptional regulator, y4mF family {ECO:0000313|EMBL:EXI73272.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
DNA-binding protein
scnpilot_solids1_trim150_scaffold_2754_curated_12
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9300..10604
DNA (1305bp) protein (435aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
phosphatidylinositol kinase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037151F8
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_solids1_trim150_scaffold_2754_curated_13
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11015..11392
DNA (378bp) protein (126aa)
Arsenic resistance transcriptional regulator n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG47_PSEU5
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAP88817.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
arsenic resistance transcriptional regulator
scnpilot_solids1_trim150_scaffold_2754_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11389..11868
DNA (480bp) protein (160aa)
arsC-3; arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG46_PSEU5
Arsenate reductase {ECO:0000313|EMBL:ABP77947.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_2754_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11893..12330
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG45_PSEU5
protein-tyrosine phosphatase
Uncharacterized protein {ECO:0000313|EMBL:ABP77946.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_2754_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12348..12707
DNA (360bp) protein (120aa)
Arsenic operon regulator n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG44_PSEU5
arsenic operon regulator
Arsenic operon regulator {ECO:0000313|EMBL:ABP77945.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_2754_curated_17
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12723..14495
DNA (1773bp) protein (591aa)
arsenical pump-driving ATPase; K01551 arsenite-transporting ATPase [EC:3.6.3.16]
Arsenical pump-driving ATPase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG43_PSEU5
Arsenical pump-driving ATPase {ECO:0000313|EMBL:BAP88813.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_solids1_trim150_scaffold_2754_curated_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14497..14793
DNA (297bp) protein (99aa)
arsenate reductase, putative; K03741 arsenate reductase [EC:1.20.4.1]
Arsenate reductase, putative n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG42_PSEU5
Arsenate reductase, putative {ECO:0000313|EMBL:ABP77943.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_2754_curated_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15063..16088
DNA (1026bp) protein (342aa)
arsenic transporter n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000373836F
Arsenic transporter {ECO:0000313|EMBL:KGH27076.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family
scnpilot_solids1_trim150_scaffold_2754_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16250..16999)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE15_RALP1
Integrating conjugative element membrane protein {ECO:0000313|EMBL:GAO21707.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16996..19155)
DNA (2160bp) protein (720aa)
conjugal transfer protein TraG n=1 Tax=Pseudomonas putida RepID=UPI000310B4A0
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:GAO21706.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2754_curated_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19181..19744)
DNA (564bp) protein (188aa)
Integrating conjugative element protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKQ8_RALPI
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21705.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
Displaying 22 items

View Taxonomy