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scnpilot_solids1_trim150_scaffold_3601_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3601_curated_1
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..332
DNA (330bp) protein (110aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQG1_DESVM
TRAP dicarboxylate transporter subunit DctM
Tax=BJP_IG2069_Desfulfarculales_53_13
scnpilot_solids1_trim150_scaffold_3601_curated_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(323..1201)
DNA (879bp) protein (293aa)
YhhN family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC29_ACISJ
YhhN family protein
YhhN family protein {ECO:0000313|EMBL:ABM43804.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_3601_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1280..2767
DNA (1488bp) protein (496aa)
fad linked oxidase domain protein; K00104 glycolate oxidase [EC:1.1.3.15]
FAD-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003770E31
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:GAD22994.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_3601_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2835..3491)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003756BEB
Uncharacterized protein {ECO:0000313|EMBL:GAD24212.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3601_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3537..4292)
DNA (756bp) protein (252aa)
protein tyrosine/serine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein tyrosine/serine phosphatase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUF0_ALIDB
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:GAO25231.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_3601_curated_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4344..4985
DNA (642bp) protein (214aa)
Amino acid transporter LysE n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7ACJ7_PSEST
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24386.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
amino acid transporter LysE
scnpilot_solids1_trim150_scaffold_3601_curated_7
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5039..5188)
DNA (150bp) protein (50aa)
Vir-repressed protein n=2 Tax=Bordetella RepID=Q7W8H3_BORPA
vir-18; vir-repressed protein
Vir-repressed protein {ECO:0000313|EMBL:CAE37461.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
scnpilot_solids1_trim150_scaffold_3601_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5283..6509)
DNA (1227bp) protein (409aa)
Putative lipoprotein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3G9_COMTE
Putative lipoprotein {ECO:0000313|EMBL:EED66650.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
lipoprotein
scnpilot_solids1_trim150_scaffold_3601_curated_9
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..7194
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UMN4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHB78599.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
scnpilot_solids1_trim150_scaffold_3601_curated_10
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7230..7787
DNA (558bp) protein (186aa)
RNA polymerase subunit sigma-24 n=3 Tax=Pseudomonas aeruginosa RepID=U5AMK5_PSEAI
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AHB76830.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
RNA polymerase sigma factor
scnpilot_solids1_trim150_scaffold_3601_curated_11
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7967..8302
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=V8DRA7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHB76831.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3601_curated_12
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8372..9265
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U5ARM1_PSEAI
UPF0276 protein X636_16305 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3601_curated_13
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9249..10037
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=V8DRV1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHB76833.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3601_curated_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10030..10539
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U5AMK0_PSEAI
DoxX {ECO:0000313|EMBL:CKI20784.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
DoxX protein; K15977 putative oxidoreductase
scnpilot_solids1_trim150_scaffold_3601_curated_15
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..10974)
DNA (408bp) protein (136aa)
Mercuric resistance operon regulatory protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HH84_BURVI
Mercuric resistance operon regulatory protein {ECO:0000313|EMBL:ERJ39809.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hg(ii)-responsive transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
scnpilot_solids1_trim150_scaffold_3601_curated_16
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11046..12542
DNA (1497bp) protein (499aa)
Mercury(II) reductase n=3 Tax=Ralstonia RepID=E2T5G4_9RALS
mercuric reductase
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_solids1_trim150_scaffold_3601_curated_17
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12548..13015)
DNA (468bp) protein (156aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
Alkylhydroperoxidase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UGG0_9BURK
alkylhydroperoxidase
scnpilot_solids1_trim150_scaffold_3601_curated_18
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13373..14017)
DNA (645bp) protein (215aa)
Cytochrome C biogenesis protein n=2 Tax=Pseudomonas aeruginosa RepID=V8DRU7_PSEAI
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHB76844.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
cytochrome c biogenesis protein transmembrane protein
Displaying 18 items

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