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scnpilot_solids1_trim150_scaffold_12121_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_12121_curated_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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26..1708
DNA (1683bp) protein (561aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHL9_ACIET
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACM34728.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_12121_curated_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1718..2470
DNA (753bp) protein (251aa)
5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase (EC:3.2.2.9); K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY
Adenosylhomocysteine nucleosidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHL8_ACIET
scnpilot_solids1_trim150_scaffold_12121_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2474..3460)
DNA (987bp) protein (329aa)
Magnesium and cobalt transport protein CorA n=2 Tax=Alicycliphilus denitrificans RepID=E8TW78_ALIDB
magnesium and cobalt transport protein cora; K03284 magnesium transporter
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_12121_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3608..4297)
DNA (690bp) protein (230aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Phage SPO1 DNA polymerase-related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9D4_ALIDK
Phage SPO1 DNA polymerase-like protein {ECO:0000313|EMBL:GAO25447.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_12121_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4324..4788)
DNA (465bp) protein (155aa)
alanine acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A8586
Acetyltransferase {ECO:0000313|EMBL:GAD23362.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ribosomal-protein-alanine acetyltransferase
scnpilot_solids1_trim150_scaffold_12121_curated_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4785..5489)
DNA (705bp) protein (235aa)
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
Peptidase M22, glycoprotease n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCS1_ACISJ
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABM44046.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_12121_curated_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5527..6969
DNA (1443bp) protein (481aa)
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ACM34717.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACM34717.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHK8_ACIET
scnpilot_solids1_trim150_scaffold_12121_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7117..8109
DNA (993bp) protein (331aa)
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037641EB
FOG: GGDEF domain {ECO:0000313|EMBL:GAD20412.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
scnpilot_solids1_trim150_scaffold_12121_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8247..9458)
DNA (1212bp) protein (404aa)
malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Malate synthase G n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2W6_ACISJ
Displaying 9 items

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