ggKbase home page

scnpilot_solids1_trim150_scaffold_1372_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1372_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T598_PSEME
scnpilot_solids1_trim150_scaffold_1372_curated_2
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

413..1381
DNA (969bp) protein (323aa)
Putative Na+-dependent transporter n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GSA7_PSEST
Membrane protein {ECO:0000313|EMBL:EXU81078.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
Na+-dependent transporter
scnpilot_solids1_trim150_scaffold_1372_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1421..3079
DNA (1659bp) protein (553aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W261_ACISJ
acyl-CoA dehydrogenase domain-containing protein; K09456 putative acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM40336.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_1372_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3094..3579)
DNA (486bp) protein (162aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXS6_ALIDB
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
molybdenum cofactor biosynthesis protein c; K03637 molybdenum cofactor biosynthesis protein C
scnpilot_solids1_trim150_scaffold_1372_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3795..5201
DNA (1407bp) protein (469aa)
Peptidase M48 Ste24p n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW0_ALIDK
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AEB86898.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_1372_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5157..5513)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXS4_ALIDB
hypothetical protein; K08972 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01957.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_1372_curated_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5533..6297)
DNA (765bp) protein (255aa)
Integral membrane protein TerC n=3 Tax=Comamonas testosteroni RepID=D0IYA3_COMT2
Membrane protein {ECO:0000313|EMBL:KGH02915.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
integral membrane protein TerC
scnpilot_solids1_trim150_scaffold_1372_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6345..6932
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG28_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48336.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_1372_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6929..8146
DNA (1218bp) protein (406aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380BC3E
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:GAD21543.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
major facilitator transporter
scnpilot_solids1_trim150_scaffold_1372_curated_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..8762)
DNA (561bp) protein (187aa)
YaeQ family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T413_ACIDE
yaeq family protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids1_trim150_scaffold_1372_curated_11
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8858..9421)
DNA (564bp) protein (188aa)
deaminase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E9092
Deaminase {ECO:0000313|EMBL:KHO63673.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
bifunctional deaminase-reductase domain-containing protein
scnpilot_solids1_trim150_scaffold_1372_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9523..10902)
DNA (1380bp) protein (460aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Adenylosuccinate lyase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQ88_DELAS
scnpilot_solids1_trim150_scaffold_1372_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10988..11608
DNA (621bp) protein (207aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX45_ALIDB
Glutathione S-transferase domain protein {ECO:0000313|EMBL:ADV01948.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_1372_curated_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11897..13099)
DNA (1203bp) protein (401aa)
Putative metal dependent phosphohydrolase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TW63_ACIAC
putative metal dependent phosphohydrolase
Putative metal dependent phosphohydrolase {ECO:0000313|EMBL:ABM35201.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1372_curated_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13096..13683)
DNA (588bp) protein (196aa)
Acriflavin resistance protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD02_ACISJ
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACM34800.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 15 items

View Taxonomy