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scnpilot_solids1_trim150_scaffold_9958_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_9958_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
Transcriptional regulator, IclR family n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J821_COMT2
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACY32901.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
scnpilot_solids1_trim150_scaffold_9958_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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432..1619
DNA (1188bp) protein (396aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KGH08629.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KGH08629.1};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVQ9_COMTE
scnpilot_solids1_trim150_scaffold_9958_curated_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1635..2303
DNA (669bp) protein (223aa)
Beta-lactamase domain protein n=2 Tax=Acidovorax RepID=A1TIV1_ACIAC
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABM30889.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_9958_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2555..4210
DNA (1656bp) protein (552aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Phosphomethylpyrimidine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR56_ALIDB
thiamine biosynthesis protein thic; K03147 thiamine biosynthesis protein ThiC
scnpilot_solids1_trim150_scaffold_9958_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4535..5416
DNA (882bp) protein (294aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Variovorax paradoxus strain MEDvA23 contig_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31555.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KIQ31555.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Variovorax paradoxus B4 RepID=T1XG57_VARPD
scnpilot_solids1_trim150_scaffold_9958_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5420..5980
DNA (561bp) protein (187aa)
nadA; quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
quinolinate synthetase n=1 Tax=Variovorax paradoxus RepID=UPI000365FED2
Displaying 6 items

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