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scnpilot_solids1_trim150_scaffold_2140_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2140_curated_1
unknown

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3..122
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036A9FDC
scnpilot_solids1_trim150_scaffold_2140_curated_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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560..1831
DNA (1272bp) protein (424aa)
acoX; acetoin catabolism protein x, ATP-nad kinase (EC:2.7.1.23)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003460F2D
Acetoin catabolism protein X {ECO:0000313|EMBL:CDM24293.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_2140_curated_3
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1828..2826
DNA (999bp) protein (333aa)
acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha (EC:1.1.1.-); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GNM7_CUPNN
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS86551.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
scnpilot_solids1_trim150_scaffold_2140_curated_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3000..4019
DNA (1020bp) protein (340aa)
Acetoin dehydrogenase E1 component beta-subunit {ECO:0000313|EMBL:CDY77391.1}; EC=1.2.4.- {ECO:0000313|EMBL:CDY77391.1};; Pyruvate dehydrogenase {ECO:0000313|EMBL:KDR44120.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
pyruvate dehydrogenase subunit beta n=1 Tax=Burkholderia kururiensis RepID=UPI00034A2202
acoB; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
scnpilot_solids1_trim150_scaffold_2140_curated_5
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4019..5140
DNA (1122bp) protein (374aa)
dihydrolipoyllysine acetyltransferase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4BB1
acoC; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system {ECO:0000313|EMBL:AFT90382.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
scnpilot_solids1_trim150_scaffold_2140_curated_6
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5177..5935
DNA (759bp) protein (253aa)
Lipoate-protein ligase A n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EI87_9BURK
lipoate-protein ligase A
Lipoate-protein ligase A {ECO:0000313|EMBL:EKZ98981.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
scnpilot_solids1_trim150_scaffold_2140_curated_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6286..8316
DNA (2031bp) protein (677aa)
ATPase AAA n=1 Tax=Cupriavidus sp. WS RepID=UPI00035FE042
Transcriptional activator of acetoin dehydrogenase operon AcoR {ECO:0000313|EMBL:CDM24292.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
acoR; acetoin catabolism regulatory protein, sigma54 interaction domain
scnpilot_solids1_trim150_scaffold_2140_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8755..9738)
DNA (984bp) protein (328aa)
hypothetical protein; K09781 hypothetical protein id=12553218 bin=BDI species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K09781 hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_2140_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9770..9928)
DNA (159bp) protein (53aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J3_ALIDK
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEB85384.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 9 items

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