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scnpilot_solids1_trim150_scaffold_2161_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2161_curated_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..102)
DNA (102bp) protein (34aa)
Type III secretion exporter n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCF1_ACISJ
Type III secretion protein {ECO:0000313|EMBL:KJA11421.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
type III secretion exporter; K02401 flagellar biosynthetic protein FlhB
scnpilot_solids1_trim150_scaffold_2161_curated_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(258..896)
DNA (639bp) protein (213aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Protein phosphatase CheZ n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGC9_ACIET
chemotaxis phosphatase, Chez; K03414 chemotaxis protein CheZ
scnpilot_solids1_trim150_scaffold_2161_curated_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(899..1240)
DNA (342bp) protein (114aa)
Response regulator receiver protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWE3_9BURK
Response regulator receiver protein {ECO:0000313|EMBL:EER61505.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
scnpilot_solids1_trim150_scaffold_2161_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1354..2364)
DNA (1011bp) protein (337aa)
flagellar motor protein MotB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FD09E
ompa/motb domain protein; K02557 chemotaxis protein MotB
Ompa/motb domain-containing protein {ECO:0000313|EMBL:GAD23907.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_2161_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2392..3252)
DNA (861bp) protein (287aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TSX3_ALIDB
Flagellar motor stator protein MotA {ECO:0000313|EMBL:GAO25140.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
mota/tolq/exbb proton channel; K02556 chemotaxis protein MotA
scnpilot_solids1_trim150_scaffold_2161_curated_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3467..4240
DNA (774bp) protein (258aa)
glucose-1-phosphate cytidylyltransferase (cdp-glucose pyrophosphorylase) (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
glucose-1-phosphate cytidylyltransferase n=1 Tax=Acidovorax radicis RepID=UPI000237750B
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_2161_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4237..5325
DNA (1089bp) protein (363aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
CDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax radicis RepID=UPI000237750A
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids1_trim150_scaffold_2161_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5322..5882
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Acidovorax radicis RepID=UPI0002377509
rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_solids1_trim150_scaffold_2161_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5879..7120
DNA (1242bp) protein (414aa)
SAM-dependent methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002377508
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_2161_curated_10
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7139..8209
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUR5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI76495.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2161_curated_11
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8223..9080
DNA (858bp) protein (286aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUR6_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGI76496.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids1_trim150_scaffold_2161_curated_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9074..9745
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RY62_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EYC49636.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2161_curated_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9825..12014)
DNA (2190bp) protein (730aa)
acetylglucosamine transferase n=1 Tax=Acidovorax radicis RepID=UPI0002377504
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_2161_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12086..12211)
DNA (126bp) protein (42aa)
flagellin n=1 Tax=Acidovorax radicis RepID=UPI0002377503
flagellin domain-containing protein; K02406 flagellin
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 14 items

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