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scnpilot_solids1_trim150_scaffold_2242_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2242_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..360)
DNA (360bp) protein (120aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E01C9
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:GAD23684.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
scnpilot_solids1_trim150_scaffold_2242_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

588..2450
DNA (1863bp) protein (621aa)
potassium transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E32EF
Kef-type K+ transport systems, membrane components {ECO:0000313|EMBL:GAD23686.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
glutathione-regulated potassium-efflux system protein kefc; K11745 glutathione-regulated potassium-efflux system ancillary protein KefC
scnpilot_solids1_trim150_scaffold_2242_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2523..3365)
DNA (843bp) protein (281aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Comamonas testosteroni S44 RepID=D8DCJ0_COMTE
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:EFI59366.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
fumarylacetoacetate (faa) hydrolase
scnpilot_solids1_trim150_scaffold_2242_curated_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3434..3868
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF40_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34310.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_2242_curated_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3935..4597)
DNA (663bp) protein (221aa)
cytochrome C n=1 Tax=Acidovorax avenae RepID=UPI0002DB1A53
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADX47740.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_2242_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4701..5543
DNA (843bp) protein (281aa)
ATPase associated with various cellular activities AAA_5 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Y4_ALIDB
AAA ATPase central domain-containing protein
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADV01237.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_2242_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5557..5784
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EHB9_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_2242_curated_8
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5789..6391
DNA (603bp) protein (201aa)
GCN5-related N-acetyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF45_ACIET
gcn5-like n-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACM34315.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_2242_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6409..7596
DNA (1188bp) protein (396aa)
von Willebrand factor A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A5C02
VWA containing CoxE family protein {ECO:0000313|EMBL:GAD23705.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09989 hypothetical protein
scnpilot_solids1_trim150_scaffold_2242_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8271..8540
DNA (270bp) protein (90aa)
Putative transcriptional regulator n=1 Tax=Variovorax paradoxus B4 RepID=T1X9K7_VARPD
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:AGU49014.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_2242_curated_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8819..10708
DNA (1890bp) protein (630aa)
Outer membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DDY7_9BURK
Outer membrane protein {ECO:0000313|EMBL:EJL90004.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
surface antigen (D15)
scnpilot_solids1_trim150_scaffold_2242_curated_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10708..14475
DNA (3768bp) protein (1256aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E74_POLSJ
hypothetical protein; K09800 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43168.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids1_trim150_scaffold_2242_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14702..15064)
DNA (363bp) protein (121aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00038115E3
Uncharacterized protein {ECO:0000313|EMBL:GAD20615.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2242_curated_14
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15119..15538
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Putative thioesterase n=1 Tax=Polaromonas sp. CF318 RepID=J2LFB9_9BURK
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_2242_curated_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15555..16292)
DNA (738bp) protein (246aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB58_ACISJ
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABM43483.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_2242_curated_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..17076)
DNA (783bp) protein (261aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=2 Tax=Acidovorax RepID=A1WB59_ACISJ
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABM43484.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_2242_curated_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17099..18070)
DNA (972bp) protein (324aa)
High-affinity branched-chain amino acidtransport system permease protein livM n=2 Tax=Comamonas testosteroni RepID=D0J0V6_COMT2
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
High-affinity branched-chain amino acidtransport system permease protein livM {ECO:0000313|EMBL:EFI60468.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
Displaying 17 items

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