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scnpilot_solids1_trim150_scaffold_33949_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_33949_curated_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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104..580
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2S6_ACIDE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
transcription elongation factor grea; K03624 transcription elongation factor GreA
scnpilot_solids1_trim150_scaffold_33949_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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583..1023
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J256_COMT2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY33959.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
scnpilot_solids1_trim150_scaffold_33949_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1004..1903
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MI01_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGH31047.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
scnpilot_solids1_trim150_scaffold_33949_curated_4
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2045..2491
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=2 Tax=Herbaspirillum seropedicae RepID=D8IXC4_HERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ61999.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
scnpilot_solids1_trim150_scaffold_33949_curated_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2546..3289)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W8H2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32934.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_33949_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3298..3786)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00234.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_33949_curated_7
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3806..4459
DNA (654bp) protein (218aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Ribosomal RNA large subunit methyltransferase E {ECO:0000255|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000255|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01547}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=RLME_ACIAC
Displaying 7 items

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