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scnpilot_solids1_trim150_scaffold_1025_curated_20

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 18069..19754

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV secretory pathway VirD4 component n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHV9_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 524.0
  • Bit_score: 296
  • Evalue 6.30e-77
putative type IV secretory pathway VirD4 component similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 524.0
  • Bit_score: 296
  • Evalue 2.00e-77
Putative type IV secretory pathway VirD4 component {ECO:0000313|EMBL:AAZ97774.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 524.0
  • Bit_score: 296
  • Evalue 8.80e-77

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1686
ATGACCATCGATTTTTTTGCGCTAATCCCATTCGCGATCGGCGTGCTTTTCAAGCTCTTCGGCTACACAGACGAAAGGGCGAAATACATATACGACCAGTATCTGTTTCCGCTCGCCTGGGGTGGACTGCCATTCTATTTTGCGTGGGTTTCCGGGTTTTCAGTCACAGATTCGGCTATCACCGGCATCGGACTCGGTTTCATGCTCGGGGCGTCGGGCCGGATAATCAACGTCAAAAGTGAGAACAAAATAGAACGTGGTACACAGGTGATCAGCACGAGCGATTTGAATCGTCGGGTTCGAGAATCCAAAGTCGAAGCGCACGCACGCATTGGCGGGGCGGCGATTCCAGAGCACGTCATGCCACAGGGCCTCCTTCTCTCAGGCAGTCCAGGTACGGGCAAGAGCTTGTCCTTTTTGCAGCTCATGAGCAGCGCCCGCGAGCGCGGTCACAAGGCCGTTGTTTGTGACCTCGGGGGCGAGTTCGCGCAACGCCTTTTCAGGCCTGGAAAAGACGTGATCCTCAACCCCTTTGACACGCGTCAGCCGGAGGGCGGCTGGTCCCCCTTTGCGGAGATCCGCAGCAGCTTCCATTGCGCCCGCGCGGCGGGGGCTCTGGTGCAAGTTGGGGATGGTGAAGAGAGCGAGACGTGGAACGGCTCAGCACGGACCCTCTTGCAAGTGGGGCTCGAGGGCCTGTTCGAGCGCGGGCCGGAGCACTGCACCAACGGCATGCTTCTCTACATGTGCTTGGCCGCGCCTCAGGAGGAGTTGAAGGATTTGGCAGCGGGTAGCCCTGCGGCCCCCTGGTTCGAGGCCGGTGCGGAGCGTTTTCTCTCGTCGGTCAAGGCCACCCTTGTCCGCCAACTGCAGCCGCTGATGTACCTCGACCCGAGCGCGGGCGCGGGGGCGTTTTCGATCCGCAAATGGATGGACCAGCCAGACGATTCCTGGCTGTTCCTGACCTACCGTGATGACCAGCTCGCCAGCCTCAAACCACTGCTCGCCGCCATGCTCGATACGGCCTGCGGAGCCATCCTCTCGCGCAGCAGCGCGGCGCCTGCGCCGACGTGGGTTTTCGTGGACGAATTCGCGAGCCTGGGCCGCGTGAATTCTCTGGTCGACCTGGCCGCGAAAGGACGCAAGTACGGCGCCCGCTTGGCCCTTGGTTTGCAGTCGATTTCACAGGCCCGCCAGAACCTCGGCAAGGACGCCGCGCAATCGCTCCTCGCGTGCCTCGGAACATGGTTGACGCTGCGTCCCGCCGACGCTGAAACAGCCGACTACATGAGCCGTTTTCTAGGCGACGAGGAGGCCCGCCGCAAGGTCGCATCAGGTGGCGAGGGCGCCACCCAAACGGGCACCCTCACCAGGCAGCAGAACGCGCACCAAAACTGGACCGAGCAGGTGACGCGCCAGCGGGCCATCCTGCCATCGGAGCTGCAGAGCCTGGCGGACCGCCAAGGCATCCTCAACATCGCAGGTCCGTTGCCCCCCGCACTTGTGGAAATCCCCATCTGCAAGCTACGGCACACCCAGCCCGCTTTCGTGGCCGCGCGCGCCCGTCCATCGCGCATTGAACGCCCCGCGATTCTAGATTCCGTCACACCCTCAAAACCGGGCACAGAAACCCAGCTGATCCCACCCCGGCCAGCGCCCGATCCGTTTGCGAATCTGGGGGGTTGA
PROTEIN sequence
Length: 562
MTIDFFALIPFAIGVLFKLFGYTDERAKYIYDQYLFPLAWGGLPFYFAWVSGFSVTDSAITGIGLGFMLGASGRIINVKSENKIERGTQVISTSDLNRRVRESKVEAHARIGGAAIPEHVMPQGLLLSGSPGTGKSLSFLQLMSSARERGHKAVVCDLGGEFAQRLFRPGKDVILNPFDTRQPEGGWSPFAEIRSSFHCARAAGALVQVGDGEESETWNGSARTLLQVGLEGLFERGPEHCTNGMLLYMCLAAPQEELKDLAAGSPAAPWFEAGAERFLSSVKATLVRQLQPLMYLDPSAGAGAFSIRKWMDQPDDSWLFLTYRDDQLASLKPLLAAMLDTACGAILSRSSAAPAPTWVFVDEFASLGRVNSLVDLAAKGRKYGARLALGLQSISQARQNLGKDAAQSLLACLGTWLTLRPADAETADYMSRFLGDEEARRKVASGGEGATQTGTLTRQQNAHQNWTEQVTRQRAILPSELQSLADRQGILNIAGPLPPALVEIPICKLRHTQPAFVAARARPSRIERPAILDSVTPSKPGTETQLIPPRPAPDPFANLGG*