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scnpilot_solids1_trim150_scaffold_5350_curated_13

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 11256..12986

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Acidovorax radicis RepID=UPI0002377BE5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 579.0
  • Bit_score: 962
  • Evalue 1.60e-277
General secretion pathway protein GspE {ECO:0000313|EMBL:KJA09654.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 577.0
  • Bit_score: 961
  • Evalue 6.50e-277
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 578.0
  • Bit_score: 957
  • Evalue 1.60e-276

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGCCACCGCCAGTCCCGTACAAAAAGACGCCCCGCTTGCGCTGCCCAGCGTGGCCCGCGCGCTCATGTCGGCGGGCAAGCTGACACAGGCCGCGGCGGAAGACGTCCTGCGTAAATCCCATTCCAACCGCATCAGCTTCATCTCCGAACTGGTCGGCTCCAAGGCGATCAGCGCCCCCGACCTGGCCCAGACGCTTTCCAGCACCTTCGGCGCGCCGCTGCTGGACATCGATGCCATTGATACGGTGCGCCTGCCCAAAGACCTGCTCGACCCCAAGCTCTGCCAGGCCTACAAGGTGATCGTGCTGGGCAAGCGCAGCAACCGCCTGATCGCCATCACCGCCGACCCGACCAATCAGGAGGCCGCGGAAAAAATCAAATTCACCACGCAGCTGGGCGTGGACTGGATCGTCGGCGAATACGACAAGCTCTCCAGGCTGGTCGATGCCACGACCAAAAGCGTGGCCGAGAGCCTGGAGGGCATCACCAGCGGCGACTTTGAGTTCGACGATACGACTGTCGAGGAGGAAGCGGAGAGCCCGGACACGGCGGGCGCCGAAGTGGAAGACGCCCCGGTGGTGCGTTTTCTGCACAAGATGCTGCTGGATGCGTTCAACATGCGCGCCTCCGACCTGCACTTCGAGCCCTACGAGCACAACTACCGCGTGCGCTTTCGCATCGACGGCGAGCTGCAGGAGATCACCTCGCCGCCGATCGCGATCAAGGACAAGCTCGCCTCGCGCATCAAGGTGATTTCGCGCCTGGACATCTCGGAAAAGCGCGTGCCGCAGGACGGGCGCATGAAGCTCAAGGTTGGCCCCGATCGCGTCATCGATTTCCGCGTCAGCACCCTGCCCACGCTGTTCGGCGAGAAGATCGTGATCCGTATCCTCGACCCAAGCAGCGCGCGCATGGGCATCGATGCGCTCGGCTACGAGCCCGAGGAAAAGGAGCGGCTGCTGGCGGCCATCAACCGGCCCTACGGCATGATCCTCGTGACCGGCCCCACGGGGTCGGGCAAGACCGTGTCGCTGTACACCTGTCTGAACCTGCTGAACAAGCCGGGCGTGAACATTTCCACGGCGGAAGACCCGTCGGAAATCAACATGCCGGGTGTCAACCAAGTCAATGTCAATGAAAAGGCCGGGATGACGTTCGCGGTGGCGCTCAAGGCCTTCCTGCGCCAGGATCCGGACATCATCATGGTCGGTGAAATCCGCGACCTGGAAACCGCCGATATCGCGATCAAGGCCGCGCAGACCGGCCACCTGGTGCTCTCCACGCTGCACACCAACGACGCGCCGACCACGCTCACGCGCATGCGCAACATGGGCATCGCGCCATTCAACATCGCCTCCAGCGTGATCCTGATCACCGCCCAGCGACTGGCGCGGCGCCTGTGCCCCCAGTGCAAGCAGCCGGCCGACATTCCCCATGAAAACCTGCTGGAGGCGGGCTACCGCGAGGAAGACATCGACGGCAGCTGGATCACCTACAAACCGGTGGGCTGCCCGGCCTGCAACAACGGCTACAAGGGCCGGGTCGGCATCTATGAAGTGATGCCGATTTCCGAGGAACTGCAGCGCATCATCCTGCAGGACGGCAGCGCGCTGGAGATCGCCGCGCAGGCACGCGCCGAGGGCGTGCGCTCCCTGCGGCAATCGGGCCTGCAGAAGGCCAGAATGGGTTTCACCTCGCTGGAAGAGGTGCTGGCCGTGACCAACGAATAA
PROTEIN sequence
Length: 577
MATASPVQKDAPLALPSVARALMSAGKLTQAAAEDVLRKSHSNRISFISELVGSKAISAPDLAQTLSSTFGAPLLDIDAIDTVRLPKDLLDPKLCQAYKVIVLGKRSNRLIAITADPTNQEAAEKIKFTTQLGVDWIVGEYDKLSRLVDATTKSVAESLEGITSGDFEFDDTTVEEEAESPDTAGAEVEDAPVVRFLHKMLLDAFNMRASDLHFEPYEHNYRVRFRIDGELQEITSPPIAIKDKLASRIKVISRLDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSARMGIDALGYEPEEKERLLAAINRPYGMILVTGPTGSGKTVSLYTCLNLLNKPGVNISTAEDPSEINMPGVNQVNVNEKAGMTFAVALKAFLRQDPDIIMVGEIRDLETADIAIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPQCKQPADIPHENLLEAGYREEDIDGSWITYKPVGCPACNNGYKGRVGIYEVMPISEELQRIILQDGSALEIAAQARAEGVRSLRQSGLQKARMGFTSLEEVLAVTNE*