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scnpilot_solids1_trim150_scaffold_5350_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5350_curated_1
unknown

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1..123
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_5350_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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152..775
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TV17_ALIDB
hypothetical protein; K07152
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:GAO22326.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_5350_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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772..1452
DNA (681bp) protein (227aa)
hypothetical protein id=12550446 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_5350_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1508..1981
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XG3_RHOFD
hypothetical protein; K07112
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_5350_curated_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1978..2391
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=1267904 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K07112
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_5350_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2519..5416
DNA (2898bp) protein (966aa)
Valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Valine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3W9_ALIDK
scnpilot_solids1_trim150_scaffold_5350_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5524..6408
DNA (885bp) protein (295aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
UTP-glucose-1-phosphate uridylyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TV20_ALIDB
scnpilot_solids1_trim150_scaffold_5350_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6409..6960)
DNA (552bp) protein (184aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380F886
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
outer-membrane lipoprotein carrier protein; K03634 outer membrane lipoprotein carrier protein
scnpilot_solids1_trim150_scaffold_5350_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7077..9398)
DNA (2322bp) protein (774aa)
cell division protein FtsK n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036201DE
Cell division protein ftsk {ECO:0000313|EMBL:GAO20406.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_solids1_trim150_scaffold_5350_curated_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9514..10464
DNA (951bp) protein (317aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Thioredoxin reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEB6_ACIET
scnpilot_solids1_trim150_scaffold_5350_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10643..10876
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=9 Tax=Comamonadaceae RepID=RL28_ACIET
50S ribosomal protein L28-like
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
scnpilot_solids1_trim150_scaffold_5350_curated_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10897..11067
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=2 Tax=Acidovorax RepID=K0I1N5_9BURK
rpmG; 50S ribosomal protein L33
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_5350_curated_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11256..12986
DNA (1731bp) protein (577aa)
type II secretory protein GspE n=1 Tax=Acidovorax radicis RepID=UPI0002377BE5
General secretion pathway protein GspE {ECO:0000313|EMBL:KJA09654.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB
scnpilot_solids1_trim150_scaffold_5350_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13008..14225
DNA (1218bp) protein (406aa)
Type II secretion system protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0I5_9BURK
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:AFU44634.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_5350_curated_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14229..15116
DNA (888bp) protein (296aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDZ1_ACIET
scnpilot_solids1_trim150_scaffold_5350_curated_16
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15120..15587
DNA (468bp) protein (156aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0D2_ALIDB
Tax=CG_Rhodof_01
Displaying 16 items

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