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scnpilot_solids1_trim150_scaffold_62276_curated_2

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(312..1295)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 338.0
  • Bit_score: 509
  • Evalue 8.70e-142
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 338.0
  • Bit_score: 509
  • Evalue 3.90e-141
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 338.0
  • Bit_score: 509
  • Evalue 2.80e-141

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGTCGATTATAGAGGGCAAACCGCCAACGGGCGTGGCCGCATGCCAGTTGCAGGTGGACGCCGAATCCGCCGGGCAGCGGCTGGACAATTTCCTGCTGCGCCACTTGAAGGGCGTGCCCAAAACGCACGTCTACCGCATCATCAGGAGCGGCGAGGTGCGCCTGAACAAGGGCCGCACCAGCGCCGATGCGCGCGTGGCCGAGGGCGACCTGGTGCGCCTGCCGCCGGTGCGCGTGGCCGAGCGGCCGCCGGTTCAGGCCGCGCCGGCGCGCGAGTTCCCCATCCTGCTCGAAGACGACTGGCTCGTCGCGCTGGACAAGCCCGCGGGCGTGGCGGTGCACGGCGGCAGCGGCGTGAGTTTCGGCGTCATCGAGCAGTTGCGCCGCGCGCGCCCCGAGGCGAAATTCCTCGAACTCGTGCACCGGCTCGACCGCGATACCTCGGGCATCCTGCTCGTGGCCAAACGCCGCTCGGCGCTCACCGCGCTGCAGCAGCAGTTTCGCGAGCGCGTCACCGGCAAGACCTATCTGGCGCTCGTGACCGGCACCTGGCCCGCCCGGCTCAAGGTGATCGATGCGCCACTGCACAAGTACCTGCAGCCCGATGGCGAGCGGCGCGTACGCACCACGACGACGCAGGACCCCGATGGTATGCGCGCGGTCACGCTGGTCAAGCGCCGCGACGTGCTGGCGCCGCGCCATGCGCAGGGCCTGCCTGCGATGAGCCTTCTGGAGGTGACGATCAAGACCGGGCGCACGCACCAGATCCGCGTGCATCTGGCCAGCCAGGGCCATGCCATCGTGGGTGACGAAAAATACGGTGACTTCGAGCTCAACAAGCGCTTGCACAAGCTCGGTTTGGCACGCATGTTCCTGCACGCGTGGCGGCTGCAATTCGATCATCCCGCGAGCGGCGAACGCATTGAACTGCACGCCGAACTGCCGCCGGACCTCGCCGCCTTCATTCCTTCCGAGACGCCATGA
PROTEIN sequence
Length: 328
MSIIEGKPPTGVAACQLQVDAESAGQRLDNFLLRHLKGVPKTHVYRIIRSGEVRLNKGRTSADARVAEGDLVRLPPVRVAERPPVQAAPAREFPILLEDDWLVALDKPAGVAVHGGSGVSFGVIEQLRRARPEAKFLELVHRLDRDTSGILLVAKRRSALTALQQQFRERVTGKTYLALVTGTWPARLKVIDAPLHKYLQPDGERRVRTTTTQDPDGMRAVTLVKRRDVLAPRHAQGLPAMSLLEVTIKTGRTHQIRVHLASQGHAIVGDEKYGDFELNKRLHKLGLARMFLHAWRLQFDHPASGERIELHAELPPDLAAFIPSETP*