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scnpilot_solids1_trim150_scaffold_62276_curated_3

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 1844..1975

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 44.0
  • Bit_score: 86
  • Evalue 2.40e-15
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 44.0
  • Bit_score: 86
  • Evalue 1.10e-14
Ribonuclease E n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZM1_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 44.0
  • Bit_score: 86
  • Evalue 7.70e-15

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 132
ATGAAACGGATGCTCATCAACGCCACGCAGCCCGAAGAGCGGCGCTTGGCCATCGTGGACGGCCAGAAGCTGCTGGACTACGAAACCGAGATCGAAGGGCGCGAACAGCGCAAGAGCAACATCTACAAGGCG
PROTEIN sequence
Length: 44
MKRMLINATQPEERRLAIVDGQKLLDYETEIEGREQRKSNIYKA