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scnpilot_solids1_trim150_scaffold_2107_curated_1

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: 2..583

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 194.0
  • Bit_score: 328
  • Evalue 1.60e-87
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 194.0
  • Bit_score: 328
  • Evalue 7.20e-87
DNA-directed RNA polymerase subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TUF2_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 194.0
  • Bit_score: 328
  • Evalue 5.20e-87

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCAGATCAAGGTGGAGAAGGGTCGGGGGTATGTTCCCGGCAACCAGCGCTGGCACGGCGATGAGCCCAACAAGGCCATTGGCCGCATCGTGATGGATGCCTCCTTTTCTCCGATTCGCCGCGTCAGCTACACCGTGGAGAGCGCTCGCGTGGAGCAGCGCACGGACTTGGACAAACTGGTGCTCGACATCGAAACCAATGGCACGGTCACGGCGGAGGAAGCCGTCCGCACCTCGGCGAAGATCCTGGTCGAACAGCTGGCGGTATTCGCCCAGCTCGATGGCGGGGATATTTTCGAAGCAGGGGCCTCCAGCACGCGTTCCAGCGGCGCGTCCTTCGATCCGGTGCTGCTGCGCCCGGTCGACGAGCTGGAGCTCACGGTGCGTTCGGCCAACTGCCTCAAGGCAGAGAACATCTACTATATCGGTGACCTGATCCAGCGTACCGAAAACGAGCTGCTCAAGACCCCGAACCTGGGTCGCAAGTCGCTCAACGAGATCAAGGAAGTGCTTGCCTCGCGCGGCCTCACCTTGGGCATGCGACTGGAGAACTGGCCCCCGGCCGGGCTCGAAAGACGTTGA
PROTEIN sequence
Length: 194
MQIKVEKGRGYVPGNQRWHGDEPNKAIGRIVMDASFSPIRRVSYTVESARVEQRTDLDKLVLDIETNGTVTAEEAVRTSAKILVEQLAVFAQLDGGDIFEAGASSTRSSGASFDPVLLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMRLENWPPAGLERR*