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scnpilot_solids1_trim150_scaffold_2107_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2107_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..583
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TUF2_ALIDB
scnpilot_solids1_trim150_scaffold_2107_curated_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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674..1063
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=2 Tax=Acidovorax RepID=RL17_ACIET
50S ribosomal protein L17-like
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_solids1_trim150_scaffold_2107_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1303..2304
DNA (1002bp) protein (334aa)
integrase n=1 Tax=Janthinobacterium lividum RepID=UPI0002887B8B
Integrase {ECO:0000313|EMBL:KEH08437.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
integrase/recombinase
scnpilot_solids1_trim150_scaffold_2107_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3836..4369)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LD41_9BURK
IntI1 protein {ECO:0000313|EMBL:GAO21876.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
truncated integrase/recombinase
scnpilot_solids1_trim150_scaffold_2107_curated_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4620..5603)
DNA (984bp) protein (328aa)
Transposase IS4 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2H5_THIK1
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADG31308.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
scnpilot_solids1_trim150_scaffold_2107_curated_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5945..6715
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0C1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJA08784.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2107_curated_7
R_OP11_Daviesbacteria_44_29, Daviesbacteria, Microgenomates, Bacteria

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6853..7518
DNA (666bp) protein (222aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_44_29_curated
scnpilot_solids1_trim150_scaffold_2107_curated_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7810..8892)
DNA (1083bp) protein (361aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VN33_POLNA
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ABM37061.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Displaying 8 items

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