ggKbase | organisms

Consensus taxonomy: Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_15

Properties

Avg. coverage: 1.00 Longest contig: 69.43 Kbp Bin length: 1.40 Mbp GC content: 65.94 %

Contigs count: 575 Features count: 1744 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38

Displaying items 251-300 of 575 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_40051_curated Species: Castellaniella defragrans (50%)	2	1028 bp	67.70	1.00	88.13
scnpilot_solids1_trim150_scaffold_16644_curated Species: Acidovorax sp. MR-S7 (100%)	2	1915 bp	69.82	1.00	93.37
scnpilot_solids1_trim150_scaffold_30947_curated Species: Acidovorax sp. KKS102 (50%)	2	1220 bp	67.38	1.00	99.10
scnpilot_solids1_trim150_scaffold_21201_curated Species: Acidovorax sp. JS42 (50%)	2	1663 bp	65.78	1.00	97.78
scnpilot_solids1_trim150_scaffold_10458_curated Species: Cupriavidus sp. HPC(L) (50%)	2	2735 bp	59.49	1.00	96.31
scnpilot_solids1_trim150_scaffold_19449_curated Species: Alicycliphilus sp. B1 (50%)	2	1730 bp	65.03	1.00	87.57
scnpilot_solids1_trim150_scaffold_35637_curated Species: Acidovorax sp. MR-S7 (50%)	2	1127 bp	73.29	1.00	99.02
scnpilot_solids1_trim150_scaffold_17822_curated Species: Ralstonia mannitolilytica (50%)	2	1857 bp	57.08	1.00	65.75
scnpilot_solids1_trim150_scaffold_40735_curated Species: Alicycliphilus sp. B1 (50%)	2	970 bp	69.79	1.00	76.39
scnpilot_solids1_trim150_scaffold_33833_curated Species: Variovorax paradoxus (50%)	2	1171 bp	72.25	1.00	94.53
scnpilot_solids1_trim150_scaffold_23204_curated Species: Acidovorax sp. JS42 (50%)	2	1514 bp	65.72	1.00	94.12
scnpilot_solids1_trim150_scaffold_33939_curated Species: RLO_Burkholderiales_65_40 (50%)	2	1121 bp	68.60	1.00	83.76
scnpilot_solids1_trim150_scaffold_39211_curated Species: Acidovorax sp. JS42 (50%)	2	1033 bp	70.47	1.00	83.64
scnpilot_solids1_trim150_scaffold_43097_curated Species: Alicycliphilus denitrificans (50%)	2	1003 bp	68.59	1.00	96.61
scnpilot_solids1_trim150_scaffold_34548_curated Species: Alicycliphilus denitrificans (50%)	2	1157 bp	70.87	1.00	85.57
scnpilot_solids1_trim150_scaffold_19797_curated Species: Collimonas fungivorans (50%)	2	1698 bp	65.14	1.00	93.99
scnpilot_solids1_trim150_scaffold_19827_curated Species: CG_Rhodof_04 (50%)	2	1697 bp	70.60	1.00	90.69
scnpilot_solids1_trim150_scaffold_39446_curated Species: Alicycliphilus sp. B1 (50%)	2	1012 bp	73.62	1.00	96.64
scnpilot_solids1_trim150_scaffold_16225_curated Species: Burkholderia phymatum (50%)	2	2036 bp	58.30	1.00	53.93
scnpilot_solids1_trim150_scaffold_14540_curated Species: Variovorax paradoxus (50%)	2	2189 bp	65.46	1.00	86.34
scnpilot_solids1_trim150_scaffold_22908_curated Species: Alicycliphilus denitrificans (50%)	2	1578 bp	69.14	1.00	100.38
scnpilot_solids1_trim150_scaffold_30508_curated Species: Acidovorax avenae (50%)	2	1190 bp	63.03	1.00	84.45
scnpilot_solids1_trim150_scaffold_37863_curated Species: Alicycliphilus denitrificans (50%)	2	976 bp	70.80	1.00	98.05
scnpilot_solids1_trim150_scaffold_35046_curated Species: Acidovorax sp. MR-S7 (50%)	2	1151 bp	70.37	1.00	99.04
scnpilot_solids1_trim150_scaffold_22725_curated Species: Acidovorax temperans (50%)	2	1578 bp	67.36	1.00	95.25
scnpilot_solids1_trim150_scaffold_37952_curated Species: GWE1_Burkholderiales_65_30_curated (100%)	2	1034 bp	75.24	1.00	100.39
scnpilot_solids1_trim150_scaffold_22727_curated Species: Acidovorax sp. CF316 (50%)	2	1573 bp	65.67	1.00	85.63
scnpilot_solids1_trim150_scaffold_24445_curated Species: RLO_Burkholderiales_65_40 (50%)	2	1490 bp	67.52	1.00	96.85
scnpilot_solids1_trim150_scaffold_40683_curated Species: Alicycliphilus denitrificans (50%)	2	1039 bp	67.76	1.00	96.44
scnpilot_solids1_trim150_scaffold_24726_curated Species: Castellaniella defragrans (100%)	2	1497 bp	67.33	1.00	89.98
scnpilot_solids1_trim150_scaffold_24744_curated Species: Acidovorax temperans (100%)	2	1482 bp	70.11	1.00	100.00
scnpilot_solids1_trim150_scaffold_13011_curated Species: Acidovorax sp. NO-1 (50%)	2	2340 bp	65.09	1.00	89.87
scnpilot_solids1_trim150_scaffold_29234_curated Species: Alicycliphilus denitrificans (50%)	2	1297 bp	67.08	1.00	102.70
scnpilot_solids1_trim150_scaffold_18073_curated Species: Acidovorax delafieldii (50%)	2	1822 bp	67.01	1.00	94.51
scnpilot_solids1_trim150_scaffold_38749_curated Species: Alicycliphilus denitrificans (50%)	2	1061 bp	62.77	1.00	77.19
scnpilot_solids1_trim150_scaffold_24963_curated Species: Hylemonella gracilis (50%)	2	1395 bp	68.60	1.00	99.78
scnpilot_solids1_trim150_scaffold_43380_curated Species: R_Burkholderiales_69_20 (50%)	2	968 bp	68.80	1.00	90.81
scnpilot_solids1_trim150_scaffold_39169_curated Species: Burkholderiaceae bacterium 26 (50%)	2	1074 bp	68.72	1.00	100.28
scnpilot_solids1_trim150_scaffold_13088_curated Species: Acidovorax sp. JS42 (50%)	2	2333 bp	64.47	1.00	92.84
scnpilot_solids1_trim150_scaffold_27944_curated Species: Acidovorax sp. MR-S7 (50%)	2	1311 bp	65.90	1.00	91.99
scnpilot_solids1_trim150_scaffold_38217_curated Species: Alicycliphilus denitrificans (100%)	2	1065 bp	66.20	1.00	84.51
scnpilot_solids1_trim150_scaffold_25006_curated Species: BJP_08E140C01_Burkholderiales_65_30 (50%)	2	1475 bp	73.76	1.00	101.29
scnpilot_solids1_trim150_scaffold_22192_curated Species: Acidovorax ebreus (50%)	2	1592 bp	66.96	1.00	98.56
scnpilot_solids1_trim150_scaffold_38763_curated Species: Acidovorax sp. JS42 (50%)	2	1138 bp	66.70	1.00	95.96
scnpilot_solids1_trim150_scaffold_40452_curated Species: Delftia tsuruhatensis (50%)	2	1029 bp	64.53	1.00	95.34
scnpilot_solids1_trim150_scaffold_41698_curated Species: Acidovorax sp. MR-S7 (50%)	2	1004 bp	62.95	1.00	89.64
scnpilot_solids1_trim150_scaffold_21408_curated Species: Castellaniella defragrans (50%)	2	1669 bp	73.28	1.00	94.01
scnpilot_solids1_trim150_scaffold_40454_curated Species: RLO_Burkholderiales_65_40 (50%)	2	1042 bp	66.89	1.00	97.89
scnpilot_solids1_trim150_scaffold_15205_curated Species: Hydrogenophaga sp. PBC (100%)	2	2095 bp	73.84	1.00	99.09
scnpilot_solids1_trim150_scaffold_11566_curated Species: Alicycliphilus sp. B1 (50%)	2	2550 bp	67.45	1.00	94.82

Displaying items 251-300 of 575 in total

solids_Burkholderiales_3

SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Burkholderiales_3

SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help