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scnpilot_solids1_trim150_scaffold_72_curated_16

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(15769..16440)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Bordetella sp. FB-8 RepID=UPI00038015E2 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 223.0
  • Bit_score: 380
  • Evalue 1.30e-102
Response regulator protein {ECO:0000313|EMBL:CDM24010.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 223.0
  • Bit_score: 411
  • Evalue 9.80e-112
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 223.0
  • Bit_score: 376
  • Evalue 6.00e-102

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGAGTACTAGTCATCGAAGACGACACGACCCTGGGGCATGCGCTCCAGGAATTCCTCAGCGGCCAGGGCTACGCCGTCGATTGGCTGCAGTCCGGCGACCGGGTCGAGGGCGCCGTGGCCGGCCAGGCCTACGATCTGCTGCTGCTGGACCTGAACCTGCCGGGCCTCAGCGGCCTGGAAGTCCTGCAGCGCCTGCGGGCGAGCGGGTCGCAGATCCCCGTGCTGATCCTGACGGCGCGCGACGGCCTGGACGACCGGGTGGCGGGGCTGGATGCCGGCGCCGACGACTACGTGACCAAACCCTTCGAACTGCCCGAACTGGCGGCCCGGGTCCGTGCGCTGGCCCGCCGGCATGCCGGCCAGGCGCAGACCATCCTGGAATGCGGGCCGCTGGCCTTCGACACGGTGGGGCGCCAGATCCGCGTCAGCGGCAAGCGCCTGGCCCTGTCCGTGCGCGAATTGTCGGTGCTGGAAATGCTGATGGCCCGCCCCGGGCGGGTGGTCACCAAGCAGCAGATCGTCAATTCCCTGTCGGCCTGGGATGCCGATTTCAGTGAAAATGCCGTCGAAGTCTATGTCTACCGCCTGCGCAAGCGCCTGGACGGAACCGGGGCCAGCATCCAGACGGTGCGCGGCTTCGGCTACCTGCTCGACGTCGAAAGTGCCTAA
PROTEIN sequence
Length: 224
MRVLVIEDDTTLGHALQEFLSGQGYAVDWLQSGDRVEGAVAGQAYDLLLLDLNLPGLSGLEVLQRLRASGSQIPVLILTARDGLDDRVAGLDAGADDYVTKPFELPELAARVRALARRHAGQAQTILECGPLAFDTVGRQIRVSGKRLALSVRELSVLEMLMARPGRVVTKQQIVNSLSAWDADFSENAVEVYVYRLRKRLDGTGASIQTVRGFGYLLDVESA*